Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g2022 ATGTACTTTAGGAGACTACAATGTCGAGATTGGAGGTGTGGTGTTTTGTTTCAGCCATCAAAATACTATAGGCCAAGATGCGAAGGTCATGCATGCTTTCATTCTCAGTGCCCTAAAACTACTGTGGAGGAATGTGTTCCGCGTGATGGCTTAATAAGGAGACGTCTATCGGAATCTTTTTTATATAGGGTTGCATCATCTTATAATGGTTGTACTGATCTGAACAGAAGGCCAAGTTTATTTTCGAGAAGTACTCAGTTTCACTTATACAGCTCAGAAAGTGATGGAAGGAATGCAAGCGAGGATAAGCATTTAAATGCAAATGGTGGAGCTCACTGCGATAAGGGAAAGAACTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCACGCTCGACTTGGGGAACGGGATCAAGAGGAACATAATAAGGTTGCTTCTTCTTATGGCACTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGTGTTCCTGGTACTGAGCTCTATCGAGAGAGATTAGTTAGAGCGCTTGCACAAGATCTAAAAGTCCCTTTGCTGGTGCTGGATAACAACATCCTTGCTCCTTACTATATTGATGATGACTTGTCGTCATCAGAATGTGAGTCTGATGATGATAATGCTGAATCTGGAGAGGAGGCTTCTCTGGAGTCAGAGGCTGAAGATGATAACGATCCAAGCAATGATGAAGAGTGGACTAGCAGTGCTGAGGCAAAGTCAGATGCTAGTGATAATGAAGACCATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCTGCTGTTCAGAAACTTGTTCCCTACAACATTGAAGACTTTGAAAAGGAGGGATTCATGATCACGTTCACAGGAGCTTCATCGGCTTTATCTTTGTACCTAAGGCGCTTAGGCAAGGCGCAGAACACCCTCATGACCTCTCGTGTGATGAGAGGCCTGGGAGGTTTAAATTGGAATGTACCGTTTTCAGATTTTAGGACTGTTCAGTGCGAAGGTTGCTGTTTGGGCAGGAATTCTGTGAAGTCATCTGAAGAGTCAGAAAATTCTGAGAGGGAGCCTAAGTTGGTTGATATATCTTGTTTGCATGCATTTTATCTGTACTGGTCATTGATGTACTTGCTGGAGCTTAGATCATTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGTTGCTGTCATCATGGACATTAGTGAAGATAACACAAAGGAGGGTGGGGTGGAGAAATCTAATGAACATACTGAATCACGACTTTGTTGGATACATGTTAATGACATTGAGCATGACCCTGATGCTCAAGTTCAGGATTGCTACATTGCTATGGAGGCTCTATGTGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGAAAGTACACAGTGGTTTCATAAATCAGTCCTGAAGTCAAACAGAAAAGAGTTCTTTCATAAGGTTGAAGAAATGTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCTGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAGCACTTGACTGAGGGACTTGGAGCCACAAAGAGATTGGATGATGATGAAATCTACAAGCTTTTCACTAATGTTTTGTCCATACATCCGCCCAAGGAGGAAGATCAACTTGGAACTTTCAAAAAGCAACTCGAGGAAGACAGGAAAGTTGTGATTTCACGTAGTAGTTTGAATGAACTACATAAGGTTCTTGAAGAACATGAGCTATTATGCTTGGACCTCTTGCAAGTAAATACTGATGGTGTCATTCTGACTAAGCAAAAAGCTGAAAAGGTGGTCGGCTGGGCAAAAAATAATTATTTGTCATCTTGCCCTCTTCCTCATGTTAAAGGAGAACGATTGTGCTTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCAAAGGATGAATATGAGAGCAACTTTGTTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCACTAAATGAGCTCGTCATCCTTCCGATGAGAAGACCGGAGCTTTTCTCTCGTGGAAACTTGTTACGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCCGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCTAATTTTATCAGCATAACTGGTTCAACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTCACCAAAGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATCCTCATACTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATACGTAGATTTGCCAGATGCTGAAAATCGGATGAAGATTTTAAGAATTTTCCTTGCACAAGAAAATCTTGATCTTGATTTTCAGTTTGACAAACTTGCTAACTTGACTGAGGGATACTCTGGCAGTGATTTAAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAGGAGCTCCTAGAAAATGAAAAGGCAAGCTGCAGTGATTTACCACCGATATTAAGGCCTCTAAAATTGGATGATTTCATTCAGGCAAAATCTAAGGTTGGGCCATCAGTTGCCTATGATGCAGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGTAGGACAAAATCTCCATTTGGGTTTGGAAGCTGA 3012 0.4253 MYFRRLQCRDWRCGVLFQPSKYYRPRCEGHACFHSQCPKTTVEECVPRDGLIRRRLSESFLYRVASSYNGCTDLNRRPSLFSRSTQFHLYSSESDGRNASEDKHLNANGGAHCDKGKNWQDKFGEDAKLCNAHARLGERDQEEHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDNNILAPYYIDDDLSSSECESDDDNAESGEEASLESEAEDDNDPSNDEEWTSSAEAKSDASDNEDHDAIATAEAALKKVKAAVQKLVPYNIEDFEKEGFMITFTGASSALSLYLRRLGKAQNTLMTSRVMRGLGGLNWNVPFSDFRTVQCEGCCLGRNSVKSSEESENSEREPKLVDISCLHAFYLYWSLMYLLELRSLSNGQRGEVYEVEGDQVAVIMDISEDNTKEGGVEKSNEHTESRLCWIHVNDIEHDPDAQVQDCYIAMEALCEVLDSKQPLIVYFPESTQWFHKSVLKSNRKEFFHKVEEMFDKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRLDDDEIYKLFTNVLSIHPPKEEDQLGTFKKQLEEDRKVVISRSSLNELHKVLEEHELLCLDLLQVNTDGVILTKQKAEKVVGWAKNNYLSSCPLPHVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFVSAVVPPGEIGVKFDDVGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDLDFQFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKASCSDLPPILRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGFGS 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g2022 1003 Gene3D - 710 985 IPR027417 -
Mibi10g2022 1003 SMART AAA_5 747 884 IPR003593 -
Mibi10g2022 1003 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 143 996 - -
Mibi10g2022 1003 Pfam AAA+ lid domain 904 939 IPR041569 -
Mibi10g2022 1003 ProSitePatterns AAA-protein family signature. 854 873 IPR003960 GO:0005524|GO:0016887
Mibi10g2022 1003 MobiDBLite consensus disorder prediction 207 240 - -
Mibi10g2022 1003 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 709 885 - -
Mibi10g2022 1003 Gene3D - 883 967 - -
Mibi10g2022 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 931 IPR027417 -
Mibi10g2022 1003 CDD AAA 749 882 - -
Mibi10g2022 1003 Pfam ATPase family associated with various cellular activities (AAA) 751 881 IPR003959 GO:0005524|GO:0016887
Mibi10g2022 1003 MobiDBLite consensus disorder prediction 242 256 - -
Mibi10g2022 1003 MobiDBLite consensus disorder prediction 207 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g2022 Mibi-ChrMibi10 43375966 43387884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g2022 745 949 Calmodulin-binding Proteins AT3G56690 36.538 1.63e-32 134