Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g2021 ATGACATCATTTCCGTCGAACCTTGAAGCATCGCCAGCGAGCCCGGAGTGGATGAACAAAGCGGACAACTCGTGGCAGCTGACGGCGGCGACGCTGGTGGGAATACAGAGTGTGCCGGGGCTGATGATATTGTACGGAGGGGCGGTGAAGAAGAAATGGGCTGTGAACTCAGCGTTCATGTCGTTGTATGCATTTGCGTGCGTGTTTGTGTGTTGGGTGATGTGGGGTTACAGACTGTCATTTGGGGACAAGCTGGTTCCATTTTGGGGGAAGCCAGCATTGTCACTGGAGGAGGTTTATCTGTTCAAGCCGGCATTCCTGGGGATGTTCCCAAACGCAACGATGGTGTATTTCCAGGGAGTGTTTGCTTGCATCACTCTGATATTGATAGCAGGGGCGGTGTTGGGGCGCATGAACTTCTACGCCTGGATGCTGTTTGTGCCCCTCTGGCTCACCTTCTCATACACATTCACGGCATTCAGCATATGGAGCCCTCAAGGGTTCCTCTCCAAGATGGGCCTCATTGACTACTCTGGAGGATACGTCATTCATCTCTCTTCCGGTGTCGCCGGTTTCACCGCTGCTTATTGGGTGGGGCCGAGGCTGAATAAGGACAGAGAGAGGTTCCCACCGAACAATATACTGCTGATGCTGGCGGGGGCTGGGCTGCTGTGGATGGGCTGGACGGGCTTCAACGGAGGGGACCCCTACTCCGTCAGCATGGACGCCTCCCTGGCGGTGCTCAACACCCACGCCTGCACTGCCACCAGCCTCCTCACGTGGGTCCTCCTAGACGTCATCTTCTTCCGCAAGCCCTCCGTCATAGGCGCAGTCCAAGGCATGATAACAGGCCTCGTCTGTATCACCCCAGCCGCGGGGGTAGTCCAAGGGTGGGCCGCCCTTCTCATGGGTCTCTTCTCGGGCTCCATCCCCTGGGCCACCATGATGGTCCTCCATAAGCGGTCCAGGCTCCTCCAGAGGGTGGACGACACCATGGCCGTCTTCCACACCCACGCCGTCGCCGGCTCCCTCGGCGGCCTCATGTCGGGCCTGTTCGCGGAGCCCAAGCTCAACAACTTCTTCTACGGCGCCTACAACAATTACGTGGGCTTTTTCTACGGCCTCCAGATGGGGGATGCCAAGATCGGGGTGAGGCAGATGGGGGTGCAGCTGTTGGGGATCCTCTTTGTCACGCTCCTCAACGTCACCGTCACCAGCTTGATATGCCTCTTCATCCGGCTGCTGATGCCGCTGAGGATGTCGGAGGAGGACATGGAGGTAGGGGACGAGGCTGCCCATGGGGAGGAGGCGTATGCCATATGGGGGCAGGGTGATAAGCTCATGGACACCACCACCTCTACTACTCTCTCCAAGTATGGCACTTCCCTCTATGATGATCTCGAGGCCAGGAAGAACAAGCGTTCTGCTGGTGGCGCCGCACAGGTCGTTGAGATGACATAG 1461 0.5797 MTSFPSNLEASPASPEWMNKADNSWQLTAATLVGIQSVPGLMILYGGAVKKKWAVNSAFMSLYAFACVFVCWVMWGYRLSFGDKLVPFWGKPALSLEEVYLFKPAFLGMFPNATMVYFQGVFACITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSPQGFLSKMGLIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVSMDASLAVLNTHACTATSLLTWVLLDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALLMGLFSGSIPWATMMVLHKRSRLLQRVDDTMAVFHTHAVAGSLGGLMSGLFAEPKLNNFFYGAYNNYVGFFYGLQMGDAKIGVRQMGVQLLGILFVTLLNVTVTSLICLFIRLLMPLRMSEEDMEVGDEAAHGEEAYAIWGQGDKLMDTTTSTTLSKYGTSLYDDLEARKNKRSAGGAAQVVEMT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g2021 486 FunFam Ammonium transporter 6 441 - -
Mibi10g2021 486 PANTHER AMMONIUM TRANSPORTER MEP2 6 449 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi10g2021 486 ProSitePatterns Ammonium transporters signature. 176 201 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mibi10g2021 486 Gene3D Ammonium transporter AmtB like domains 5 442 IPR029020 -
Mibi10g2021 486 PRINTS Rhesus blood group protein signature 215 233 IPR002229 GO:0005886
Mibi10g2021 486 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005886
Mibi10g2021 486 PRINTS Rhesus blood group protein signature 246 268 IPR002229 GO:0005886
Mibi10g2021 486 Pfam Ammonium Transporter Family 25 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mibi10g2021 486 TIGRFAM amt: ammonium transporter 22 438 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi10g2021 486 SUPERFAMILY Ammonium transporter 17 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g2021 Mibi-ChrMibi10 43371671 43373377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g2021 113 450 Inorganic Solute Cotransporters AT2G38290 62.722 1.47e-139 404