Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1999 ATGCGACGGGAGAATCAGCCTTCGGCTGAAGGCGGTGGTGGAGGAGAAAGGGGACCGAAACAGGAAAGTTTCGATCTTGAAGCGGAAATCGAGGTGAAGCAAGAACAAAGTTTCGATCTTCACACCGAACAAGTGAGAATCGAACCATTAACGGAAGCCACCGACATTGTCAAGAAAAGCCGCGGCAGAAAGCGTAAGTCCGAGACGGAGGCCTCAGGGAACAACGAGGTTTTGGCAGAGTCGACGAGGCGTAGTGCTAGAGTATCGCAGAAATCGTTCTCTCCTGTTTACTTGGACTATGAAGACGACGACGACGAACCTAGAAAAAGGAAACGTGGGAGAGGTCGTAAAAAGACGAAAATTGAACAAGGTGCAGGAGCTGAGGACAATGGCATCGAAGAAGTAGAAAGTGGAGACAAGAAAATTTCAAGGCGTGGGAAGGCGGCTCAGGCAGAACACCAAGTATCAGAGGTTCAAGGTTCAATGAGAGCTGATAGAGATTCTTCAGAAAGAACATCGACTAAAGGCTATAGTTTGAGGGCTTCTAAATCTGAAGTTAATAAGCAGGAGACGCCCAAAATAAACAAGCACGATCCTGAATGGATTGAAAAGGTGTCCTTAATGTGCCATCAGTGTCAGAGAAATGATAAGGGGGAGGTTGTTAGGTGTACTAAATGTAAGCGGAAAAGATTTTGCCTTCCCTGTTTAAAGAGTTGGTATCCTCAATTGAGAGAGGAAGATATTGCTGAGGAGTGTCCTGTGTGTCGTGGAAACTGCAATTGCAAAGCATGTCTGAAATCTGATAAATTAATCGCAGCTATGAAGAAGGAAGCAGAAGTTAAGAAAGGAAAACCTGCCACAACCGAGGAAGTTGAGCACTATAAGTATTTGCTATCTGTGCTTCTTCCATATTTAAGGCAGCTACATGAAGAACAAGTGATCGAGAAGGAGATTGAAGCTAAGAAACAAGGCGTTTCACTTTCAGAGCTCCAGGTAAGAGGGACAGGTTGCACTGAAAAGGAGCGTCTTTACTGTGACAATTGTAGAACTTCAATTTTTGATTGTCATCGAAGCTGTCAAGAGTGTTCTTTAGACATCTGTCTGGTCTGTTGCCGTGAGATTCGTCAGGGACATTTGGTTGGAGGTGCAGAGCCAGTTAAGTCTGAGCTTATCAGCCGGGGACTAAAATATATGCATGGTGACACTGAAGAGGGGTCAACAATAACTCCATTAAATGTGGAGACGAAGACTGAGGATCGTGATTGGTCAAGATCTGATTTGAAGGTGACAAGTGATGGTAGTATTCCTTGTCCAAGGGTTCATGGTGGTTGTGGTTGTAGTCATCTTGAACTTCGATGTATATTTCCTGATAACCAGATTTCTGAACTTGTAAAGAAGGCAGAAGATATGGCCAAAGTATATAAGCTTGATGATTCGACACAGACAAGTAACCAGAGGTGTTCATGTTTCAAGCTAGATGGCATCAACAACAATGTTGGAAATGAGAATAGGAGGAAGGCTGCTTCTCGTGAAGACCCTAATGTTACTGACAACTATATATATTGCCCAAGGGCTGTAGATTTAGGACCTTTGGACCTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCAGTGATTGTCAGCAATGTGCTCGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCGAGTTACTAATACCAAGAATGATCAACATTTGGAAGTGAAGGTCCTTGATTGCTTGGACTGGTGTGAGGGAGACGTCAATATCCACCAATTCTTTACAGGGTACTCAGAAGGTCGAAAAGATTTTGCCAAGTGGCCTCAATTATTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAAAGATTACCACGCCACTGTGCTGAGTTCATTTCTTCCTTACCGTACAAGGAATATACAAATCCTCATTATGCTGTTCTAAACCTGTATACCATGCTGCCAGATAAAACTATAAAACCGGACATCGGTCCGAAGACATATATAGCTTATGGGATTCCTATGGAGCTTGGGCGAGGCGATTCGGTGACAAAGCTTCACTGTGACATGTCTGATGCAGTGAATGTTTTGACTCATACTTTTGAGACGCCTCTTGATGCTGATCTCCTTTCAACAATTGAGGATTTAAAAAAAAAGCACCTTAAACAAGACAGAGAGGAACTAAATTGCGATGGTCAGGATATAGAAACTAATATCGAAAATGGAAAAACTACATGTTCAGAAAGTAATTTTCTTGGATATGATTCTGTTGAGGGAGGTGCTCTCTGGGATATTTTTAGGAGGCAGGATGTGCCTAAACTACAGGAATACCTTAAGAAGCACTGCGAAGAATTCAGGCACGTCAGCTGTATTAGGTTGCAGCAGGTTGTTCATCCTATCCACGATCAGACCTTTTATTTGACTATGGATCATAAAAGAAAGCTGAAGGAGGAATATGGAATTGAACCATGGACATTTGTTCAGAAATTGGGAGATGCAGTGTTTATTCCTGCTGGCTGTCCTCACCAAGTCAGAAATCTCAAGTCTTGTATCAAGGTTGCTCTCGATTTTGTGTCGCCTGAAAGTATGGAAGAGTGTATTCGTTTAACACAGGAATTTCGCACACTTCCCATAAATCACAGGGCTAGTGAGGACAAATTGGAGGTAAAAAAAATGCTTATTCATGCAATGGGCAACGTAGTGGAGAAATTGGAGAGAGCAAGGTTAGTGATAAAACTTCTCAAGATCTAA 2781 0.4279 MRRENQPSAEGGGGGERGPKQESFDLEAEIEVKQEQSFDLHTEQVRIEPLTEATDIVKKSRGRKRKSETEASGNNEVLAESTRRSARVSQKSFSPVYLDYEDDDDEPRKRKRGRGRKKTKIEQGAGAEDNGIEEVESGDKKISRRGKAAQAEHQVSEVQGSMRADRDSSERTSTKGYSLRASKSEVNKQETPKINKHDPEWIEKVSLMCHQCQRNDKGEVVRCTKCKRKRFCLPCLKSWYPQLREEDIAEECPVCRGNCNCKACLKSDKLIAAMKKEAEVKKGKPATTEEVEHYKYLLSVLLPYLRQLHEEQVIEKEIEAKKQGVSLSELQVRGTGCTEKERLYCDNCRTSIFDCHRSCQECSLDICLVCCREIRQGHLVGGAEPVKSELISRGLKYMHGDTEEGSTITPLNVETKTEDRDWSRSDLKVTSDGSIPCPRVHGGCGCSHLELRCIFPDNQISELVKKAEDMAKVYKLDDSTQTSNQRCSCFKLDGINNNVGNENRRKAASREDPNVTDNYIYCPRAVDLGPLDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRRVTNTKNDQHLEVKVLDCLDWCEGDVNIHQFFTGYSEGRKDFAKWPQLLKLKDWPPSNLFEERLPRHCAEFISSLPYKEYTNPHYAVLNLYTMLPDKTIKPDIGPKTYIAYGIPMELGRGDSVTKLHCDMSDAVNVLTHTFETPLDADLLSTIEDLKKKHLKQDREELNCDGQDIETNIENGKTTCSESNFLGYDSVEGGALWDIFRRQDVPKLQEYLKKHCEEFRHVSCIRLQQVVHPIHDQTFYLTMDHKRKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPESMEECIRLTQEFRTLPINHRASEDKLEVKKMLIHAMGNVVEKLERARLVIKLLKI 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1999 926 FunFam Transcription factor jumonji domain-containing protein 517 893 - -
Mibi10g1999 926 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 206 281 IPR018866 -
Mibi10g1999 926 MobiDBLite consensus disorder prediction 20 71 - -
Mibi10g1999 926 MobiDBLite consensus disorder prediction 1 193 - -
Mibi10g1999 926 Gene3D Cupin 526 893 - -
Mibi10g1999 926 ProSiteProfiles JmjC domain profile. 653 884 IPR003347 -
Mibi10g1999 926 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 60 917 IPR045109 GO:0032454|GO:0033169
Mibi10g1999 926 Coils Coil 728 748 - -
Mibi10g1999 926 MobiDBLite consensus disorder prediction 159 173 - -
Mibi10g1999 926 MobiDBLite consensus disorder prediction 72 92 - -
Mibi10g1999 926 ProSiteProfiles Zinc finger RING-type profile. 209 256 IPR001841 -
Mibi10g1999 926 Pfam JmjC domain, hydroxylase 771 867 IPR003347 -
Mibi10g1999 926 SMART cupin_9 634 884 IPR003347 -
Mibi10g1999 926 SUPERFAMILY Clavaminate synthase-like 529 908 - -
Mibi10g1999 926 MobiDBLite consensus disorder prediction 133 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1999 Mibi-ChrMibi10 43161355 43175369 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi10g1999 JmjC 5.9e-16 CL0029