Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1969 ATGATTCGGAGCTTCACGACAATGATCATGATGGCTTTGTTTCTTTTTCCGAGTATCAACCTCCCACTTGGGTTCATATTCCAGCTTTCTGCACCCAGCCGAAACCAAAAATCCAAAGCTACTTCAATGGTTGTGCCGGGAGGACGTCAGATGCTTGTCGTTGGGTTTGAGGATGTAAAAGTAATTTTAGAGAAACTGCCGTCTGAACGACAGAGCATGCTTTTTTCTGCAACCATGCCTAGCTGGGTGAAGAAACTTGCCAAAAAATATTTGGACGATCCATTGACAATTGATTTGGTAAAGTATTGTTTATGCAAAGGGTGGAAAGACTATGTTGTGTTTACCCAAACAAAAAGAGATGTTGATGAAGTATCATTGGCATTAACAAATAGCATACCTTCTAAGGCACTGCATGGGGATTTATCTCGGCATCAAAGAGAGAGAGAGAGAACATTGAATGGTTTTCAGCAAGGGAAATTCACAGTTGTTGTTGCAACTAATGTAGCGGCACGTGGACTTGATATTTCTAATGTTGATTTGGTAAGTTCAACAGGATGCTTTGTGGTTCATGCTTTGAACATTCGATCTCTGGTCTTGGTTCTGCATGAGAGAGAAATTTAG 621 0.409 MIRSFTTMIMMALFLFPSINLPLGFIFQLSAPSRNQKSKATSMVVPGGRQMLVVGFEDVKVILEKLPSERQSMLFSATMPSWVKKLAKKYLDDPLTIDLVKYCLCKGWKDYVVFTQTKRDVDEVSLALTNSIPSKALHGDLSRHQRERERTLNGFQQGKFTVVVATNVAARGLDISNVDLVSSTGCFVVHALNIRSLVLVLHEREI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1969 206 Gene3D - 35 98 IPR027417 -
Mibi10g1969 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 182 IPR027417 -
Mibi10g1969 206 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 98 206 IPR001650 -
Mibi10g1969 206 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 105 183 - -
Mibi10g1969 206 SMART helicmild6 122 197 IPR001650 -
Mibi10g1969 206 Gene3D - 99 195 IPR027417 -
Mibi10g1969 206 Pfam Helicase conserved C-terminal domain 106 182 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1969 Mibi-ChrMibi10 42960830 42963362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1969 50 181 Eukaryotic Initiation Factors Gene Family AT3G19760 29.193 1.29e-12 63.9