Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1955 ATGAAAAACGAATATAAGCATTCTTTGGCGCTAAAACCAAAATGTGACATTTCGCATTTCCCACTCCTTCAATTTCAATATCTTCGTCTGATTTATACCCATCCTCGTCTTCATTCATTTCACCTTCAGCATTCCCTCTCTCTGCTGGATCGAAGCTTTGAAGCATTCGAAATGGCAGGTGGAAAATCAAGCAGGTCAAACCCCTCTCAGGCTAGAAAGAGAGTTGACGCTGTCGATTCTCGTGCTGCTTCTGGCCTTGTTCGTGCCAAAGATGGCAGTGCTTTTGCCAAATGTGAAGAGTGCAATAAGAATGTTCCTGCGGCCCTTATCAGCATGCATAGTTGCAGCCTTGATGCTAAAATTAAAATGAATCTGGAGGCTCAGGTTGTGGAAAAGCCTGCTGAGGTCAAGAAGCCAGTGGAGAGGAAGAGGCCTAAATCAAGTGAGCCTAAGGCGAAAAAGGCCAAGGTGGAGAAGGCGGATAAGGGGAAGAAGAGCAAGGATCCTAACAAGCCCAAGCGCCCTCCTACAGCCTTCTTTGTCTTCCTGGAAGAGTTTAGAAAATCTTTTAAGGAGGCAAATCCTGATTCTAAGGACGTTAAGAGGGTTGGTAAGGAGGCAGGTGAGAAGTGGAAGTCCTTATCTGATGAGGAGAAGAAGCCTTACTTGGATAGAGCTGCTGAACTGAAGGCAGAATACGAGAAAGCATTGGAAAGTTATAATGCCGGAGAAGACGAAGCTGATCAAGATGGATCTGATAAAGAAAATGCTGCCGAGGAAGGGGGCCGAGAGGAGTCTGAGAAGGAAGATGAAACCAAGGAAAATGAAGAACTCACTGACGAGGAGTAG 849 0.4582 MKNEYKHSLALKPKCDISHFPLLQFQYLRLIYTHPRLHSFHLQHSLSLLDRSFEAFEMAGGKSSRSNPSQARKRVDAVDSRAASGLVRAKDGSAFAKCEECNKNVPAALISMHSCSLDAKIKMNLEAQVVEKPAEVKKPVERKRPKSSEPKAKKAKVEKADKGKKSKDPNKPKRPPTAFFVFLEEFRKSFKEANPDSKDVKRVGKEAGEKWKSLSDEEKKPYLDRAAELKAEYEKALESYNAGEDEADQDGSDKENAAEEGGREESEKEDETKENEELTDEE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1955 282 SUPERFAMILY HMG-box 163 243 IPR036910 -
Mibi10g1955 282 CDD HMGB-UBF_HMG-box 172 238 - -
Mibi10g1955 282 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 71 270 - -
Mibi10g1955 282 MobiDBLite consensus disorder prediction 134 178 - -
Mibi10g1955 282 Coils Coil 223 246 - -
Mibi10g1955 282 MobiDBLite consensus disorder prediction 254 269 - -
Mibi10g1955 282 MobiDBLite consensus disorder prediction 193 222 - -
Mibi10g1955 282 MobiDBLite consensus disorder prediction 236 282 - -
Mibi10g1955 282 Gene3D High mobility group box domain 155 258 IPR036910 -
Mibi10g1955 282 MobiDBLite consensus disorder prediction 134 172 - -
Mibi10g1955 282 SMART hmgende2 171 242 IPR009071 -
Mibi10g1955 282 Coils Coil 261 281 - -
Mibi10g1955 282 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 172 241 IPR009071 -
Mibi10g1955 282 Pfam HMG (high mobility group) box 172 241 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1955 Mibi-ChrMibi10 42786366 42788132 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mibi10g1955 HMG_box 1.8e-21 CL0114