Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1945 ATGCGTGTATGTATATATATATACACACTAAATGTGGGATTTGGAGGAGTAAGGAAGTTGAGACAAAATGGGCTTGAAAAAGAGGCTAAGGTTGGTTGGCCTTGTTTTGTTTTGTCTCTCTCTCCTCTCTCCAGAAGGGCAAACCCTAAAGAGCCGTTTACACCCACCAAATCTGCTATTGAAAGTTCTGAGATTTTTGGAGCCCCTTACCTTGCTTGTTTGCTTTCTCTCTTAATGGGGTTTTTCGATCTGTACGCGCCGCTTTCCCTTTGTTTTCTGTCTGTTTGGTTGCTAGGAAAATGTAGGAACCGTCGCGATTTTCAGATCGTGAACTTTCTGCATTTTGCTCTAATGGACGATGATGCATTGAACATGCGCAATTGGGGCTATTATGAACCCTTCAAAGGGGGGCATCTAGGTCTCCAGCTCATGTCTAGTATGACGGAACGGGACACTAAGCCATTTATGCCTGGCCGTGACCCTGCTATGCTAGTCACTCCAAATGGAAGCTTTCACCCCCGGGATTGTGTTGTCTCAGAAGCCCCAATTCCAATGAACTATGTTAGAGACAGTTGGATCAACCAGAGAGATAGGTTTCTCAATATGTTACCCACAAATCCTAATTATGCTGTTCTTCCAGAAACATCTGGAGCTCCTTCCTTGCAAATCATACAGCCGCCTGAGACATCAAGGGATGAAAGGGTGAATCAAGTTGAAGACCCTCCTGTCAAGAAGGAGGCTGGCCAGTTGAAGAAAAGGCAGAATGGGGGCGCTCCAAAGGCTCCGAAGGCGAAAAAACCGAGGAAGCCTAAGGATAATAGCAATGCTCTGGTTCAACGTGAGAAGCCACCAAGGAAGGCTATGGAGGTTGTGATTAATGGAATTGATATGGACATTTCTGGCCTACCCATTCCTGTTTGCTCCTGTACTGGAGCTCCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATGTATCCATTGCCAATGAGCACTAAAAGGCGCGGCGCAAGGATAGCTGGACGGAAAATGAGTCAGGGTGCTTTTAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGTTATGATTTTGACAATCCTATTGATCTGAGGACTCACTGGGCTAGGCATGGCACCAACAAGTTTGTCACTATCAGGTAA 1188 0.4588 MRVCIYIYTLNVGFGGVRKLRQNGLEKEAKVGWPCFVLSLSPLSRRANPKEPFTPTKSAIESSEIFGAPYLACLLSLLMGFFDLYAPLSLCFLSVWLLGKCRNRRDFQIVNFLHFALMDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPAMLVTPNGSFHPRDCVVSEAPIPMNYVRDSWINQRDRFLNMLPTNPNYAVLPETSGAPSLQIIQPPETSRDERVNQVEDPPVKKEAGQLKKRQNGGAPKAPKAKKPRKPKDNSNALVQREKPPRKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYDFDNPIDLRTHWARHGTNKFVTIR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1945 395 MobiDBLite consensus disorder prediction 211 231 - -
Mibi10g1945 395 SMART GAGA_bind_2 118 395 IPR010409 -
Mibi10g1945 395 PANTHER - 118 395 IPR010409 -
Mibi10g1945 395 MobiDBLite consensus disorder prediction 211 287 - -
Mibi10g1945 395 Pfam GAGA binding protein-like family 118 395 IPR010409 -
Mibi10g1945 395 MobiDBLite consensus disorder prediction 268 287 - -
Mibi10g1945 395 MobiDBLite consensus disorder prediction 232 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1945 Mibi-ChrMibi10 42673437 42675444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1945 118 395 BBR or BPC Transcription factor family AT2G01930 58.725 3.38e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mibi10g1945 GAGA_bind 1.1e-112 No_clan