Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1935 ATGCCCCGTGGGGCCCTCAGTGACTACCTTAAAGGACCTGTTAACAAGTCACTTCCATGGAAGCAAAGGCTTGAGATCTGCATAGGAGCAGCAAACGCACTGCGTTATCTTCATACCCACAATGGAGAGAAAAAGCAAAGCGTGATCCACCGTGACGTGAAAACCTCAAACATTCTTTTAGGCGATGATTGGGTGGCAAAGGTTTCAGATTTCGGATTGTCCAAGATTGGACCAGATGGTTTATCCAAGTCACATGTTACCACAATTGGCAAAGGGAGCATTGGGTATATAGATCCAGAATACTACCAAACTCAGCAGCTGACACTAAGATCTGATGTTTACTCTTTCGGAGTGGTTTTACTTGAGGTTTTGTGTGGGAAGCCACATATATTTCGAAATGTGGAGAAGCAACAGTGTTGTTTAGTGGACTGGGTTAAGAAATGCTATGAGAAAGGAGAGATTGGTGAGGTGGTTGATCCATTTTTGACGGGGAGAATAACGCATCAGTGTCTGAATAAGTTTATTCAAATAGCACTATCTTGTCTGCATGAGAATGGGAGGCATAGGCCATCAATGGGAGATGTTGCGAGTGACTTAGAGACTGTGTTGATGATGCAGAGGAGCATGGAGGTTGCAGATTTAACAGGACCAGGCACGGTGCGCCTTCGTTTCCTTGCTCTCCTTTTTTCCACCTCTCCTAAATCATAA 708 0.4463 MPRGALSDYLKGPVNKSLPWKQRLEICIGAANALRYLHTHNGEKKQSVIHRDVKTSNILLGDDWVAKVSDFGLSKIGPDGLSKSHVTTIGKGSIGYIDPEYYQTQQLTLRSDVYSFGVVLLEVLCGKPHIFRNVEKQQCCLVDWVKKCYEKGEIGEVVDPFLTGRITHQCLNKFIQIALSCLHENGRHRPSMGDVASDLETVLMMQRSMEVADLTGPGTVRLRFLALLFSTSPKS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1935 235 Gene3D Transferase(Phosphotransferase) domain 1 1 215 - -
Mibi10g1935 235 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1935 235 PIRSF ILK 1 212 - -
Mibi10g1935 235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Mibi10g1935 235 Pfam Protein tyrosine and serine/threonine kinase 1 199 IPR001245 GO:0004672|GO:0006468
Mibi10g1935 235 SMART serkin_6 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1935 235 PANTHER OS07G0166700 PROTEIN 1 206 IPR045272 GO:0004714|GO:0006468
Mibi10g1935 235 SUPERFAMILY Protein kinase-like (PK-like) 1 198 IPR011009 -
Mibi10g1935 235 FunFam Receptor-like protein kinase FERONIA 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1935 Mibi-ChrMibi10 42563846 42564553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1935 1 210 Receptor kinase-like Gene Family AT3G51550 54.762 2.83e-75 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi10g1935 PK_Tyr_Ser-Thr 1.8e-27 CL0016