Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1931 ATGGTCTTTATCTCCTCTCTAATTTCTTCTCTACAATTTCTGTACAAACTCCTACAAGTTCTAGTAGCTTACCATTATGGTGTACTGTTGAATGGAATTGAAATTTTCAAGATCAGTGATCAAAGTTACAATCTTGGAGGACCCAATCCTGACCCAACATCTTCTTCACCAACCACACCATCATCAAAAACCTCAAAGAAAAACACAAAATCTTTCATGACGATTGTCGTTGTGAGTGCAGCTTCAGGTGTCATTGTGCTATCTGTCATTGGTTTCTTGATATTTCGGCAAATGAAGACCAGATGTGTAGGGAACATGACAGATAATAAATCATTTGATTCGTGGCGTAAGTTTTCAATCGCAGAGATTAGAGCGGCCACCAACAACTTTGATAAACTGACAATCATTGGTCACGGAGGATTTGGTGAAGTCTATAGAGGACGCATTAAAAAGGGGAAGACATCAACCTTGGTAGCCATCAAACGGCAGAAAGCAGAATCACAACAAGGGGTTGAGGAGTTCGAGACAGAGATCAAGATATTGTCCCAATTTCGCCATCCAAACTTGGTTGAACTCATTGGCTACTGCAATGATGACAAGGAGATGATCCTGGTTTATGAGTTCATGCCCCGTGGGGCCCTCAGGGACTACCTTAAAGGAGCTGTGAACGTGTCACTTCCATGGATGCAAAGGCTTGAGATATGCATAGGAGCAGCAAAGGCGCTGCGCTATCTTCATACCTACAATTGGGGGAACAAGCAGAGTGTGATCCACCGTGACGTGAAAAGCTCAAACATTCTTTTAGGCTATGACTGGGTAGCAAAGGTTTCAGATTTCGGATTGTCCAAGATTGGGCCGAATGGTTTGTCCAGGTCACATGATACCACAGAAGTCAAAGGCAACTTAGGTTACCTTGACCCAGAATACTTTATGACTCTGAAGCTGACACAGCGATCTGATGTTTACTCTTTTGGTGTGGTTTTATTGGAGGTTTTGTTTGGGAGGCCTCATATATTTCGACATGAGGCGATGCATCACGGTTGGCTAGTGGACTGGGTTAGGAAATACTATGAGAAAGGAGAGATGGGTGAGGTGGTCGATCCATTTTTGAAGGGGACGGTAACACCTCAGTGTCTAAATAAGTTTGCTCAAATAGCACTGTCTTGTCTACATGAAAATGGGAGGTTTAGGCCATCGATGAGAGATGTTGTGAGTGACTTAGAGACTGTGTTGAAGATGCAGGGGAGCATGGAGGTTGCAAATATAACGGCACCATAA 1278 0.4335 MVFISSLISSLQFLYKLLQVLVAYHYGVLLNGIEIFKISDQSYNLGGPNPDPTSSSPTTPSSKTSKKNTKSFMTIVVVSAASGVIVLSVIGFLIFRQMKTRCVGNMTDNKSFDSWRKFSIAEIRAATNNFDKLTIIGHGGFGEVYRGRIKKGKTSTLVAIKRQKAESQQGVEEFETEIKILSQFRHPNLVELIGYCNDDKEMILVYEFMPRGALRDYLKGAVNVSLPWMQRLEICIGAAKALRYLHTYNWGNKQSVIHRDVKSSNILLGYDWVAKVSDFGLSKIGPNGLSRSHDTTEVKGNLGYLDPEYFMTLKLTQRSDVYSFGVVLLEVLFGRPHIFRHEAMHHGWLVDWVRKYYEKGEMGEVVDPFLKGTVTPQCLNKFAQIALSCLHENGRFRPSMRDVVSDLETVLKMQGSMEVANITAP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1931 425 SMART serkin_6 130 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1931 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Mibi10g1931 425 SUPERFAMILY Protein kinase-like (PK-like) 107 408 IPR011009 -
Mibi10g1931 425 CDD STKc_IRAK 136 408 - -
Mibi10g1931 425 Gene3D Phosphorylase Kinase; domain 1 102 208 - -
Mibi10g1931 425 FunFam Receptor-like protein kinase FERONIA 209 424 - -
Mibi10g1931 425 ProSiteProfiles Protein kinase domain profile. 130 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1931 425 PANTHER OS07G0166700 PROTEIN 115 414 IPR045272 GO:0004714|GO:0006468
Mibi10g1931 425 FunFam receptor-like protein kinase FERONIA 95 208 - -
Mibi10g1931 425 MobiDBLite consensus disorder prediction 47 66 - -
Mibi10g1931 425 Gene3D Transferase(Phosphotransferase) domain 1 209 422 - -
Mibi10g1931 425 Pfam Protein tyrosine and serine/threonine kinase 134 407 IPR001245 GO:0004672|GO:0006468
Mibi10g1931 425 ProSitePatterns Protein kinases ATP-binding region signature. 136 161 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1931 Mibi-ChrMibi10 42554205 42555482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1931 25 418 Receptor kinase-like Gene Family AT3G51550 45.921 5.36e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi10g1931 PK_Tyr_Ser-Thr 1.3e-49 CL0016