Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1918 ATGATTGGGGGGAAAGATCTTCCGAATGGTCTTGACTCTGATGGGGAGAATTCTCGGAGCAAGCTGTCAAGGCCCAATTTTGACCGTACCAAGGACAACACTGGAGAGAAATTAGGTTATCCCCTAAAAGGTGCGTACTTTCTGAAGAATTCAGAGGATGGTGGTGATGGGATTCTGTTAAAACCCTCAAAGGTCGGAACTTCAGGATTACAAGAGCTTACCCTTAGTTACCTCTGTGAAAAGGAGATTCCTGGTAGAAGCTTGCTGAGTTGCAAGGGTAAGGAAGTTCTCATCTCTGAGGATTCAAATCATGGTGAGAAATGGGTTGAAAGGGATTTCCTTAATTTGAGCGAAACTAGGGAGAATTGTTCGAAGCGATCGGTTGAAGAAGATGTTGAGAGGGAAATCAAGGAGAAGAAGCCGAAGCTGGAGACGCTTAATCTCTCTCTTGCTTTGCCTGATGTCTCACTTTCTCTTACTGCGTCAAACGCCTTGCAAAACGGTGATCAGCCTGTGAGGCCAAAGCCTAGCAAACCTTCAGCGACTAATAATACGTATTCTAATGATTATACAACTGCTTCTCTATCATACTCCTATTCCCATCCTTTCTCGCATAATCCAAGTTGCTCGCTTACTCGTAATTCTACTGATTTTGATTATTCTGTTAGCAAAGATGATCATATTTGGAACTGTGGGGAGGGGACTAATGGGTCAGTTCATAGTCGATTCAAGCCTATAGGAGATGGGGTTGCCTTGTCTAATCATGGTGGTGGTGGTGGGTTTAATTCGATCATGCAGGGTAATAATAGTCAGTATAAAACTACAAGTTCGGATAACCATTCTTTCTTTCCATCGGAATTGCCTGCCAGGCCAAGATTTGAGGCTCAGTCAGGGGACTCAAGAGGGAGGAATTCTGAGAATATGAGGGTATTAGAAGGTTTAGATAGTGGCAAAGTAAGGAAGCTTTCTAGGCCAGAGAAACTTCTCAGGGAGATTGTGTTGGAGTCTGTCCCAACCATGGCTACTCAGTTTCAAGAGCTTACCGATGAAGCGATTGCATCGACTAAGGAGTACTTAAAGAATCTCATTGAGATGCCTGAGAAGAGAGAGGAATTGGTCAGCCTCCAGAATAGGCTTGAGCGAAGATCCGACCTTAGTAAGGAGATTCTTTCTAAGTGCCACAAGGGGCAGCTTGAGATTTTAGTTGCTGTCAAGATGGGGCTTTCTAGCTTCTTATCTGGCAAAGTCCAATTCTCTGAGATGGTAGAGATTTTCTTGCATATGAGATGTAGAAATGTGAATTGTAGGAGCTTGCTGCCTGTTGATGACTGTGACTGCAAGATTTGTTCTGGAAATAAGGGATTTTGCAGTTCTTGCATGTGCCCTGTCTGTCTGAACTTTGATTGTGCAAGCAACACATGTAGTTGGGTTGGTTGTGATGTCTGTTCTCACTGGTGCCATGCTGCCTGCGGCATTAAGAGGAATCTTATCAAACCTGGGCCTAGCTTAAAAGGGCCATCAGGGACCACTGAGATGCAGTTTCATTGCAGTGGATGTGGACATGCTTCAGAAATGTTTGGCTTTGTTAGAGATGTGTTCATATGTTGTGCAAAGGATTGGGGTCTTGAAACCCTGGTGAAAGAGCTTGACTGTGTAAGGAGAATTTTCAAAGAAAGTGAAGATCGCAAAGGGAAGGAATTGCATTTCAAAACTGATGACATGCTCTATAAGCTTCAAACTAAAACGGTGTCTCCTTTGGATGCCTGCAATTACATCCTACAATTTTTCAACTATGCAGATAGCATGTTAGACTTTCCTGCTTCTGGTATATCTTCAAAGGACTTGTCAGCATCTCAGGCTAATATTAGGAAGGAAGCTACATCTCTCTCACAATCCAATTCTCTAATGTCAAAATATGCTTATAACTCGAGCTATTCAAGGTCACAATGTGATGCTCTGTCAAATGATATTCATCATCAGAAAGATATCAAAACTTCCATCTTAAGTGAATTGAAAAGTGACAGTGATTTCCAGCTGGGGGCTCTGTTAAGGAAAGGTGGGATCGAAAACTTGGAGAGCATTGTGAGGATCAAGGAAGCAGAAGCCAAAATGTTCCAAACCAAGGCCGATGAAGCCCGGAGAGAAGCCGAAGGGTTCCAGAAGATGTTAAGGATGAAAACGACGCAGATGGAGGAAGAGTATGCTGAGAGGCTTGCCAAGCTCTCTCTTCAAGAGACTGAGGAAACCCGGAGGAAAAAACTGGAGGAATTGAAGGTCTTAGAAAATTCCCATTGTGATTACTTTAAAATGAAAATGAGAATGCAAGCTGAGATTGCTGGTTTGTTGGAGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAA 2382 0.4316 MIGGKDLPNGLDSDGENSRSKLSRPNFDRTKDNTGEKLGYPLKGAYFLKNSEDGGDGILLKPSKVGTSGLQELTLSYLCEKEIPGRSLLSCKGKEVLISEDSNHGEKWVERDFLNLSETRENCSKRSVEEDVEREIKEKKPKLETLNLSLALPDVSLSLTASNALQNGDQPVRPKPSKPSATNNTYSNDYTTASLSYSYSHPFSHNPSCSLTRNSTDFDYSVSKDDHIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGGGFNSIMQGNNSQYKTTSSDNHSFFPSELPARPRFEAQSGDSRGRNSENMRVLEGLDSGKVRKLSRPEKLLREIVLESVPTMATQFQELTDEAIASTKEYLKNLIEMPEKREELVSLQNRLERRSDLSKEILSKCHKGQLEILVAVKMGLSSFLSGKVQFSEMVEIFLHMRCRNVNCRSLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWVGCDVCSHWCHAACGIKRNLIKPGPSLKGPSGTTEMQFHCSGCGHASEMFGFVRDVFICCAKDWGLETLVKELDCVRRIFKESEDRKGKELHFKTDDMLYKLQTKTVSPLDACNYILQFFNYADSMLDFPASGISSKDLSASQANIRKEATSLSQSNSLMSKYAYNSSYSRSQCDALSNDIHHQKDIKTSILSELKSDSDFQLGALLRKGGIENLESIVRIKEAEAKMFQTKADEARREAEGFQKMLRMKTTQMEEEYAERLAKLSLQETEETRRKKLEELKVLENSHCDYFKMKMRMQAEIAGLLERMEATKQQWV 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 343 365 IPR004082 -
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 421 442 IPR004082 -
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 467 487 IPR004082 -
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 382 397 IPR004082 -
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 728 750 IPR004082 -
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 689 709 IPR004082 -
Mibi10g1918 793 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 540 559 IPR004082 -
Mibi10g1918 793 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 121 792 IPR004082 -
Mibi10g1918 793 Pfam Coiled-coil region of Oberon 664 782 IPR032535 -
Mibi10g1918 793 MobiDBLite consensus disorder prediction 164 187 - -
Mibi10g1918 793 Coils Coil 743 763 - -
Mibi10g1918 793 MobiDBLite consensus disorder prediction 1 37 - -
Mibi10g1918 793 Coils Coil 695 715 - -
Mibi10g1918 793 CDD PHD_OBE1_like 460 519 - -
Mibi10g1918 793 MobiDBLite consensus disorder prediction 17 36 - -
Mibi10g1918 793 Coils Coil 771 791 - -
Mibi10g1918 793 Pfam PHD - plant homeodomain finger protein 430 554 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1918 Mibi-ChrMibi10 42360358 42363810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1918 361 530 PHD Gene Family AT5G57380 23.232 8.51e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1918 10 42360358 42363810 Mibi10g1918 10 42360358 42363810 ECH