Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1917 ATGATGACGCCAAATTTGAACTTGGAACCCGAAAATCATTCGGATGTCAGTAGCCAAGTAGCTTCCAATATATCCTTGCAAGAAACCTCCCATGATCTTACCAAGGAAAGCATCACAACTTCTTCCTGTCTAACAAATCTCACAAAACCTGAAACTGATCTGGTGTCCTTTTCGCTCAACTTGTCACTTAACTTCAACTCGGGTGATGGCGAGTTGAAGCGCACGAGTGATGCCAGCAGTGAAGTGGGAGCTGAAGCACAGCCTTCAGGATCAGCAGTACCCAGGGTGTTCTCTTGTAATTACTGTAGGAGGAAGTTCTTCAGCTCTCAGGCATTGGGAGGCCATCAAAATGCACATAAAAGGGAGAGGACAATGGCGAAGCGTGCGATGCGAATGGGGATGTTCACTGAGAGGTATACAAGCCTGGCATCACTGCCTCTTCATGGTTCTGCTTTTCGGTCTCTCGGTATTGAAGCTCATGCTGCCATGCACCAAAGACACATACCATCACTGAGGGCTCCCAACCTAAGAGCTGGTGCAAAATTTGAGAAAGATTATTTTGGATCACCAATGTTCATGGAAGATGATGATAATATGGGTCTGTTTTGGCCCGGGAGCTTCCGGCAGGTGGAAGGTGGAGCCGGCGTTAATATGGTACATGAACACGTTCCAAGCTCAACTACTAATTTTGTGGCAATCGCACCACCACCACCACCACCACTGCCCCTACCCCCTCCACAACCACAAACATCCACACCTCCTGATCTCACTCTGAAGCTCTGA 783 0.4815 MMTPNLNLEPENHSDVSSQVASNISLQETSHDLTKESITTSSCLTNLTKPETDLVSFSLNLSLNFNSGDGELKRTSDASSEVGAEAQPSGSAVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSAFRSLGIEAHAAMHQRHIPSLRAPNLRAGAKFEKDYFGSPMFMEDDDNMGLFWPGSFRQVEGGAGVNMVHEHVPSSTTNFVAIAPPPPPPLPLPPPQPQTSTPPDLTLKL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1917 260 Gene3D Classic Zinc Finger 77 144 - -
Mibi10g1917 260 MobiDBLite consensus disorder prediction 232 260 - -
Mibi10g1917 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Mibi10g1917 260 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 25 174 IPR044246 GO:0009788
Mibi10g1917 260 MobiDBLite consensus disorder prediction 71 92 - -
Mibi10g1917 260 MobiDBLite consensus disorder prediction 1 21 - -
Mibi10g1917 260 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Mibi10g1917 260 MobiDBLite consensus disorder prediction 232 252 - -
Mibi10g1917 260 FunFam Zinc finger protein 2 73 143 - -
Mibi10g1917 260 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1917 Mibi-ChrMibi10 42354195 42354977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1917 91 260 C2H2 Transcription Factor Family AT1G66140 43.367 1.67e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi10g1917 None None None