Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1913 ATGGGTATCAAGATGCAGAGTCAGCACCAGCACCACCCTGTGGCTTTGAAGTTCCATGAGCAAACAGGCAGTAAAACAAAATACACTTTCATTCAGGCTAAAAGAGCTTGGCTCCCAAAGTTTTTGCTGCTGTGGATCATGTTGATGATGGTATTCAGTGGCTCCATCTATAATAGTATGGATGATGATAATAAAGTTAGGAGGAGGGAGGTTCTGGGTAGCCTCTGTGAGCAAAGAGCTAGGATGTTGCAAGATCAATTTAGTGTTAGTGTAAACCATGTCCATGCCCTAGCTATTCTGGTTTCAACCTTCCACTACTACAGAAACCCATCAGCAATTGATCAGGAAACCTTTGCGGAGTATACTGCCAGAACAGCATTTGAGCGGCCATTACTGAATGGGGTGGCCTATGCACAGCGGGTCGTTCATTCTGAAAGAGAAAACTTTGAGAGGCAACATGGATGGGGGATAAAGACTATGGAAAGAGAGCCTTCCCCGGTTCGAGATGAGTATGCACCAGTAATATTTGCCCAAGAAACTATCTCTTATCTTAAGTCTCTTGATATGATGTCAGGGGAGGAGGACCGAGAAAACATTCAGAGGGCTAGGGCAACTGGGAAAGCTGTGCTGACTAGCCCATTTAGGCTGTTGGGTTCTCATCATCTTGGTGTGGTGTTGACTTTCCCTGTTTACAAATCCAAGCTCTCCCCAGAGCCAACTATGAAAGAGCGCATAGAGGCAACTGCAGGATATGTTGGAGGATCCTTTGATGTTGAATCCCTTGTGGAGAATTTACTTGGGCAGCTGGCTGGAAACCAAGCAATTTTGGTGCATGTGTATGATATCACGAACTCTACTTACCCGCTAATCATGTATGGCAACCAAAATGAAGAAGGTGATAAGTCTCTTGTACATAAAAGCAAGCTTGATTTTGGAGATCCTTACAGGAAACATCAGATGATATGTAGGTATCATCAGAAGGCACCAACACCTTGGACGGCGCTTACCACATCATTTTTATTCTTTGTGATTGGTTTATTAGTGGGGTACATTTTATATGGTGCTGCAATTCATATTGTCAAAGTTGAGGATGATTTCCATGAGATGGAGGAACTGAAAGTTCGAGCTGAAGCTGCTGATGTTGCCAAATCCCAGTTTTTAGCAACCGTTTCTCATGAAATTAGAACGCCAATGAATGGCATCCTAGGAATGCTTGGCCTGCTTCTAGATACGGAATTGAGTTCAACTCAACGAGATTATGCTCAGACTGCTCAAGCATGCGGAAAAGCACTGATAGCTTTAATAAATGAGGTGCTTGACCGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAAGCAGTTCCTTTTGACTTGCGATCCATACTCGATGATGTCCTTTCTTTATTCTCTGAGAAGTCTAGACACAAAGGTTTAGAGTTAGCAGTCTTTGTTTCTGATAAAGTTCCAGACATTGTTATGGGAGATCCCGGGAGATTCAGACAAATAATAACCAATTTAGTAGGCAACTCTGTCAAATTCACTGAACGAGGGCACATATTTGTCAAGGTTCATCTTGCTGAAAATATAACTGCTGCAATGAATGGAAAAACTGAGGCACATCTTAATGGAGGATCGGATGACGTTGTGCATATGGCTTGTGGTTATCAGTCCAAAACTCTTAGTGGGTGTGAAGCAGCTGATGAAAGGAACTGTTGGGATAATTTTAAGCATCTAATTGCTGATGAAGAATTTTGCTTTGATGCATCAAGTAAAAAGATGACCACTATTCAAGTTTCTGAGCAAGTTACTCTGATGGTCTGTGTAGAGGATACTGGTATTGGGATTCCCTTTTCTGCTCAGGATAGGATTTTCATGCCTTTTGTGCAGGCAGACAGCTCAACCTCTCGAAACTACGGGGGCACTGGTATTGGATTAAGCATCAGTAAGTGTTTGGTTGAATTAATGGGTGGTCAAATAAACTTCATAAGCCGACCACAGGTCGGAAGCACATTTTCCTTCACTGCAATTTTTGGTACATATAAGAAAAATTCAGTCAGTGACGTGAAGAAACATAATGTGGAAGATCTACCTTCTAGTTTTAGAGGACTGAAAGCCATAGTGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTCGATACCATCTGAAGAGGCTTGGGATAGTAGCTAAGGTTGCTAATAACATTAACAAGGCAGTTGCTTTATGTGGGACAAACGGTTCATTGACATCTGGAAAGTTCCAGCCAGATATAATTTTGGTTGAGAAGGACTTGTGGATATCTGTAGAAGATGGAAGCTTCAATGTTTGGCAACGAGACTGGAAACAGAACGGGCATACAATTAAGTTGCCCAAATTGATCCTTCTTGCAACCAACATTAGTAATGCCGAGTTTGATAAAGCTAAGGCTGCCGGTTTTGCTGATACTGTGATCATGAAGCCTCTGAGAGCTAGTATGGTAGCTGCTTGTCTTCAGCAAGTTCTTGGTGTGGGGAAGAAGAGACAGCCTAACGGTGGTTCCACTTTTCTTCGAGGCCTTCTTTGTGGAAAGAAAATTTTGGTGGTTGATGACAATGCAGTGAACAGAAGGGTTGCTGCAGGTGCGTTGAAAAAGTTTGGAGCTGATGTGAAGTGTGTCGAAAGCGGCAAAGCGGCACTTGAAATGCTTCAATTGCCTCACAGTTTTGACGCCTGCTTCATGGACATCCAAATGCCAGAAATGGATGGGTTTGAAGCAACACGACGAATCCGGCTGATGGAATGTAATGCGAATGAGCAGGCAAATGGTGAATCTGATGAGGGAAATGCCTCTAAAAGGGAGTGGCATTTGCCAATATTAGCCATGACAGCTGATGTAATTCATGCTACCTATGATGAGTGCCTGAAATGTGGTATGGATGGATACGTGTCAAAGCCATTTGAGGAAGAGAATCTCTATCAGGAAGTTGCAAAGTTCTTCAAATCCAAGCCTATCGCAGACTCATGA 3003 0.4296 MGIKMQSQHQHHPVALKFHEQTGSKTKYTFIQAKRAWLPKFLLLWIMLMMVFSGSIYNSMDDDNKVRRREVLGSLCEQRARMLQDQFSVSVNHVHALAILVSTFHYYRNPSAIDQETFAEYTARTAFERPLLNGVAYAQRVVHSERENFERQHGWGIKTMEREPSPVRDEYAPVIFAQETISYLKSLDMMSGEEDRENIQRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLSPEPTMKERIEATAGYVGGSFDVESLVENLLGQLAGNQAILVHVYDITNSTYPLIMYGNQNEEGDKSLVHKSKLDFGDPYRKHQMICRYHQKAPTPWTALTTSFLFFVIGLLVGYILYGAAIHIVKVEDDFHEMEELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLGLLLDTELSSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAENITAAMNGKTEAHLNGGSDDVVHMACGYQSKTLSGCEAADERNCWDNFKHLIADEEFCFDASSKKMTTIQVSEQVTLMVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQVGSTFSFTAIFGTYKKNSVSDVKKHNVEDLPSSFRGLKAIVVDGKPVRAAVTRYHLKRLGIVAKVANNINKAVALCGTNGSLTSGKFQPDIILVEKDLWISVEDGSFNVWQRDWKQNGHTIKLPKLILLATNISNAEFDKAKAAGFADTVIMKPLRASMVAACLQQVLGVGKKRQPNGGSTFLRGLLCGKKILVVDDNAVNRRVAAGALKKFGADVKCVESGKAALEMLQLPHSFDACFMDIQMPEMDGFEATRRIRLMECNANEQANGESDEGNASKREWHLPILAMTADVIHATYDECLKCGMDGYVSKPFEEENLYQEVAKFFKSKPIADS 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1913 1000 SMART CHASE_2 109 294 IPR006189 -
Mibi10g1913 1000 CDD HATPase_EvgS-ArcB-TorS-like 499 677 - -
Mibi10g1913 1000 Pfam Response regulator receiver domain 858 924 IPR001789 GO:0000160
Mibi10g1913 1000 Gene3D - 446 680 IPR036890 -
Mibi10g1913 1000 PANTHER TWO-COMPONENT HISTIDINE KINASE 24 989 - -
Mibi10g1913 1000 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 436 674 IPR036890 -
Mibi10g1913 1000 Gene3D - 358 445 - -
Mibi10g1913 1000 Gene3D - 852 998 - -
Mibi10g1913 1000 Gene3D - 698 837 - -
Mibi10g1913 1000 SMART HKATPase_4 494 679 IPR003594 -
Mibi10g1913 1000 SUPERFAMILY CheY-like 855 992 IPR011006 -
Mibi10g1913 1000 SMART REC_2 856 988 IPR001789 GO:0000160
Mibi10g1913 1000 ProSiteProfiles Response regulatory domain profile. 857 992 IPR001789 GO:0000160
Mibi10g1913 1000 ProSiteProfiles Response regulatory domain profile. 704 834 IPR001789 GO:0000160
Mibi10g1913 1000 Pfam His Kinase A (phospho-acceptor) domain 382 447 IPR003661 GO:0000155|GO:0007165
Mibi10g1913 1000 Coils Coil 432 452 - -
Mibi10g1913 1000 ProSiteProfiles CHASE domain profile. 109 321 IPR006189 -
Mibi10g1913 1000 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 675 IPR003594 -
Mibi10g1913 1000 Pfam CHASE domain 112 292 IPR006189 -
Mibi10g1913 1000 Gene3D CHASE domain 113 328 IPR042240 -
Mibi10g1913 1000 SMART HisKA_10 382 447 IPR003661 GO:0000155|GO:0007165
Mibi10g1913 1000 FunFam Histidine kinase 4 113 328 - -
Mibi10g1913 1000 CDD HisKA 382 443 IPR003661 GO:0000155|GO:0007165
Mibi10g1913 1000 PRINTS Bacterial sensor protein C-terminal signature 639 657 IPR004358 GO:0016310|GO:0016772
Mibi10g1913 1000 PRINTS Bacterial sensor protein C-terminal signature 663 676 IPR004358 GO:0016310|GO:0016772
Mibi10g1913 1000 PRINTS Bacterial sensor protein C-terminal signature 604 618 IPR004358 GO:0016310|GO:0016772
Mibi10g1913 1000 PRINTS Bacterial sensor protein C-terminal signature 622 632 IPR004358 GO:0016310|GO:0016772
Mibi10g1913 1000 FunFam Histidine kinase 4 354 445 - -
Mibi10g1913 1000 FunFam Histidine kinase 3 851 996 - -
Mibi10g1913 1000 CDD REC_hyHK_CKI1_RcsC-like 858 988 - -
Mibi10g1913 1000 ProSiteProfiles Histidine kinase domain profile. 389 679 IPR005467 -
Mibi10g1913 1000 SUPERFAMILY CheY-like 700 835 IPR011006 -
Mibi10g1913 1000 Gene3D - 60 112 - -
Mibi10g1913 1000 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 448 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1913 Mibi-ChrMibi10 42301151 42308219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1913 12 1000 Histidine Kinase Gene Family AT2G01830 71.116 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi10g1913 HATPase_c 2.3e-31 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1913 10 42301151 42308219 Mibi10g1913 10 42301151 42308219 ECH