Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1912 ATGGAGAAACCCCATTTAAGTTTCTGGGTTTCTTTCTTACACCGTTTCCTTTTGATTCTTTCCATGGTCTTGTTTGCTAAGTCTCAGGACTCATCAGTTATGACCATTCTCAAGAACTCTATCGACGGGACGGGTTCTCTCAAATGGTCCGACCCGGATTTCTGCAATTGGGATCACATTCAATGCAGTTCTTCAAAACGGGTCACTGCGATTCAGATTGGGAACTTGAACCTGCAAGGCTCACTGCCAAAGGAGCTTTCTCAGCTCACTGAATTACAGCGTTTTGAGTGCCAATCAAACAGTCTCTCAGGGGCATTTCCGTCATTACCCAGTTCTCTACAACGCCTCTACATTTCGGACAATGGTTTCACCTCTATGCCTCCTGATTTCTTCAAGGACAAGTCGTTGTTGGAAGAAATAAGAATGGACAATAACCCCTTTTCTCCATGGCGAATTCCAGATACAATCAAGGATTGTGTGGCATTACAGACATTCTCCGCGATGAATGCTTCTTTTGTCGGAGAAATTCCTGATTTTTTCGGCAAAGATGGTCCTTTACCAGGTTTGACTAAATTGAATCTGTGTTTTAACCGACTTGTAGGTGGGTTGCCTTTGAGCCTCTCTGGAAGTTCAATTGAGTTACTTTGGGTGAATGGACAGAAGAGTAATTCTAAACTTAATGGCACACTTGCTGTTTTACAGAACATGACTTCATTGAAGCAAATCTGGGTTCATGGTAATTCATTCACTGGTCCTATCCCTGACTTGTCCCACCATGATCAGTTGTGGGATGTGAGTTTGAGGGACAACCAGTTAACTGGTGTGGTTCCTTCTTCTCTTATGGCTCTTCCTAGTTTGCAAGTTGTGAATTTAACTAATAACTATCTTCAAGGACCCATGCCTGCGTTTAAACCAGGAGTGCGTGTGGATATAGATGGAATAAATCAGTTTTGCACGACCAAACCTGGTCAGCCATGTAGTTCTTTGGTGAATGCTTTATTGTCTGTGGTTGAACCTATGGGTTATCCCTTGAAGTTTGCTCAAAGTTGGAAGGGAAATGATCCTTGTGCTGGGAACTGGATGGGGATTGTTTGCTCAGGTGGAAATATTACGGCTGTGAATTTTCAGAACATGGGTCTTTCTGGGACTATTTCTCCCACGTTTTCCAGCCTCACATCTGTGAAAAGGTTGCTTCTTGCAAACAATAATCTCACTAGTACTATACCTAAGGAGCTTACAAGTATGCCTGTTTTGGAAGAGCTGGATATTTCAAATAATCATATATATGGTGTGTTGCCAGCATTTCGGAATGGTGTGATTGTTAAATCGAATGGGAATCCTGATATTGGTAAGGATAAGCCTTCTGCTCCACCTGGACCTGACTCTGGTAATACTCCAAGTAGCGGTAAGAAACATCGTTCAACGGTCATTGTTGTCGTTGTTGTGGTGGGGCTTGTTGTTTTACTTGGTGTGGTAGTTTGGGGACTCGTTTGGTTTAACAGAAAAAGGAGGCATTCAAGGAAAACTCAAGGTCAGAATGGCGTAGTGGTACATCCTCAGCATTCTGGAGACAGAAATCACTTGAAAATCAGTGTTGTAGGTGGTGATAGAGGAAGAACTAATGAACAGATTACCAGTACTGGTGATAATGCAGCTAGTGATGTTCGTGTGGTGGAAGCTGGTGGTATGGTAATTTCAATTCAAGTTTTGAGAGAAGCTACCAACAATTTCAGTAGAGAGAACATACTGGGGAGGGGTGGTTTTGGGACTGTGTACTTGGGAGAATTGCATGACGGCACAAAGATCGCGGTGAAGAGAATGGAATCCGGAGTGGAGGGTGAGAAAGGGCTGAGTGAATTCAGAGCTGAAATCGCTGTACTCACTAAGGTTCGTCATAAGCATCTGGTTGCTCTCATGGGGTATTGCTTGGATGGGAATGAGAGGCTTCTTGTGTATGAGTATATGCCTCAGGGGACTCTAAGTAGGCATTTATTCAACTGGAAAGATGAAGGGTTAAAGCCATTGGAATGGACAAGAAGACTTATCATTGCCTTGGATGTTGCTAGAGGAGTTGAGTATCTTCACGGTTTAGCCCAACAGATTTTCATTCATAGGGATCTCAAACCATCAAACATCCTGCTCGGCGATGATATGCGAGCCAAAGTGTCTGACTTTGGATTGGTTCGTCTCGCTCCCGAAGGAAAAGCCTCATTTGAAACCAGACTTGCTGGAACCTTTGGCTATTTGGCACCTGAATATGCAGTGACCGGGCGAGTAACGACGAAGGTGGATGTTTATAGTTTTGGAGTGATTCTTATGGAGATAATAAGTGGGAGGAAAGCACTTGATGATAGTCAAACTGAAGAGAATGTCCACTTAGTCACATGGTTTCGAAGAATGATGCTGAACAAGGACATGTTCCGAAAGGCCATTGATCCTGAAATAGATGTCAATGAAGAAACTCTTCCTAGCATCAGCACGGTTGCTGAGCTGGCAGGCCATTGCTGCGCAAGGGAGCCACATCAAAGGCCGGACATGGGGCACGCCGTGAACGTGCTGGCGCCTCTTGTGGAAGTGTGGAAGCCTACAGAAACAAGTTCTTGTGATGACATTGGTGGGATTGATCTTGATATGGACCTACCTCAAGCTCTTAAGAAATGGCAGGCTTTTGAAGGAATGAGTTATACAACCACCAACATGCCCATGGATGCTACTACTTCTGCATCTTTGATTTCTAGTGCAGATAGTACACAGTCAAGCATACCCCCAAGGCCATTTGGACTTGGAGCTTCTTTCACTTCTTCTGATGGAAGATGA 2817 0.4405 MEKPHLSFWVSFLHRFLLILSMVLFAKSQDSSVMTILKNSIDGTGSLKWSDPDFCNWDHIQCSSSKRVTAIQIGNLNLQGSLPKELSQLTELQRFECQSNSLSGAFPSLPSSLQRLYISDNGFTSMPPDFFKDKSLLEEIRMDNNPFSPWRIPDTIKDCVALQTFSAMNASFVGEIPDFFGKDGPLPGLTKLNLCFNRLVGGLPLSLSGSSIELLWVNGQKSNSKLNGTLAVLQNMTSLKQIWVHGNSFTGPIPDLSHHDQLWDVSLRDNQLTGVVPSSLMALPSLQVVNLTNNYLQGPMPAFKPGVRVDIDGINQFCTTKPGQPCSSLVNALLSVVEPMGYPLKFAQSWKGNDPCAGNWMGIVCSGGNITAVNFQNMGLSGTISPTFSSLTSVKRLLLANNNLTSTIPKELTSMPVLEELDISNNHIYGVLPAFRNGVIVKSNGNPDIGKDKPSAPPGPDSGNTPSSGKKHRSTVIVVVVVVGLVVLLGVVVWGLVWFNRKRRHSRKTQGQNGVVVHPQHSGDRNHLKISVVGGDRGRTNEQITSTGDNAASDVRVVEAGGMVISIQVLREATNNFSRENILGRGGFGTVYLGELHDGTKIAVKRMESGVEGEKGLSEFRAEIAVLTKVRHKHLVALMGYCLDGNERLLVYEYMPQGTLSRHLFNWKDEGLKPLEWTRRLIIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIISGRKALDDSQTEENVHLVTWFRRMMLNKDMFRKAIDPEIDVNEETLPSISTVAELAGHCCAREPHQRPDMGHAVNVLAPLVEVWKPTETSSCDDIGGIDLDMDLPQALKKWQAFEGMSYTTTNMPMDATTSASLISSADSTQSSIPPRPFGLGASFTSSDGR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1912 938 FunFam Leucine-rich repeat receptor-like kinase 328 452 - -
Mibi10g1912 938 SMART LRR_typ_2 111 133 IPR003591 -
Mibi10g1912 938 SMART LRR_typ_2 283 305 IPR003591 -
Mibi10g1912 938 SMART LRR_typ_2 415 437 IPR003591 -
Mibi10g1912 938 SMART LRR_typ_2 391 414 IPR003591 -
Mibi10g1912 938 SMART LRR_typ_2 186 210 IPR003591 -
Mibi10g1912 938 Gene3D Ribonuclease Inhibitor 328 453 IPR032675 -
Mibi10g1912 938 MobiDBLite consensus disorder prediction 443 470 - -
Mibi10g1912 938 CDD STKc_IRAK 583 856 - -
Mibi10g1912 938 Gene3D Transferase(Phosphotransferase) domain 1 655 870 - -
Mibi10g1912 938 Pfam Leucine rich repeat N-terminal domain 331 366 IPR013210 -
Mibi10g1912 938 Pfam Leucine rich repeat N-terminal domain 31 63 IPR013210 -
Mibi10g1912 938 PANTHER OSJNBA0070M12.3 PROTEIN 13 938 - -
Mibi10g1912 938 SUPERFAMILY L domain-like 32 436 - -
Mibi10g1912 938 ProSiteProfiles Protein kinase domain profile. 577 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1912 938 FunFam receptor protein kinase TMK1 539 654 - -
Mibi10g1912 938 ProSitePatterns Protein kinases ATP-binding region signature. 583 605 IPR017441 GO:0005524
Mibi10g1912 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Mibi10g1912 938 Pfam Leucine rich repeat 387 428 IPR001611 GO:0005515
Mibi10g1912 938 SUPERFAMILY Protein kinase-like (PK-like) 558 862 IPR011009 -
Mibi10g1912 938 Gene3D Phosphorylase Kinase; domain 1 539 654 - -
Mibi10g1912 938 Gene3D Ribonuclease Inhibitor 27 322 IPR032675 -
Mibi10g1912 938 MobiDBLite consensus disorder prediction 909 924 - -
Mibi10g1912 938 Pfam Protein kinase domain 578 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1912 938 MobiDBLite consensus disorder prediction 909 938 - -
Mibi10g1912 938 SMART serkin_6 577 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1912 938 FunFam receptor protein kinase TMK1 655 872 - -
Mibi10g1912 938 FunFam Receptor-like kinase TMK4 28 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1912 Mibi-ChrMibi10 42272547 42275782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1912 68 859 Receptor kinase-like Gene Family AT5G07280 31.039 1.05e-84 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mibi10g1912 Pkinase 5.2e-47 CL0016