Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1899 ATGATTTATATTTATAATGCTGGTGTGCTTTCACTTCTCCAGTTCAACATTGCCAATCCCACCACTGGATGCCAAAAGAAGCTTGAAATTGATGACGATGCTAAACTCCGAGCGTTTTGGGACAAGAGGATATCACAAGAAGTCAGTGGAGATGCCTTGGGGGAGGAGTTTAAGGGCTATGTTTTCAAAATAACTGGGGGATGTGATAAACAGGGTTTTCCAATGAAGCAGGGAGTGCTGACTCCTGGACGTGTTCGCCTCTTGCTTCACAGAGGAACTCCTTGCTTCCGGGGCTACGGAAGAAGGAATGGAGAGAGGAGAAGGAAGTCTGTTAGGGGTTGCATTGTGAGTCCAGACCTCTCTGTTCTTAACTTGATTATTGTGAAGAAAGGTGAGAATGATCTTCCTGGATTGACTGACATCGAGAAGCCTAGAATGAGAGGGCCAAAAAGGGCTTCAAAGATCAGGAAATTGTTTAACCTCTCCAAGGAGGATGACGTGCGCAAATATGTCAACACATATCGCAGAACCTTTACGACTAAAACTGGTAAGAAGGTAAGCAAAGCCCCTAAAATTCAGAGGTTGGTTACTCCCTTGACATTGCAAAGGAAGAGAGCTAGAATTGCAGACAAGAAGAAGAGAATTGCAAAGGCTAAGGCAGAGGCTGCTGAATATCAAAAGCTGCTTGCCAGCCGATTGAAGGAACAACGTGAACGCCGCAGTGAGAGTTTGGCCAAGAGGAGATCTAAGCTCTCTGCTGCATCTAAGCCATCAGTGACTGCTTAA 786 0.4542 MIYIYNAGVLSLLQFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLIIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKRRSKLSAASKPSVTA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1899 261 Pfam Ribosomal protein S6e 14 140 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mibi10g1899 261 SMART Ribosomal_S6e_2 13 140 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mibi10g1899 261 PANTHER 40S RIBOSOMAL PROTEIN S6 14 252 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mibi10g1899 261 MobiDBLite consensus disorder prediction 234 261 - -
Mibi10g1899 261 ProSitePatterns Ribosomal protein S6e signature. 64 75 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mibi10g1899 261 MobiDBLite consensus disorder prediction 234 249 - -
Mibi10g1899 261 Gene3D - 145 246 - -
Mibi10g1899 261 Coils Coil 201 235 - -
Mibi10g1899 261 PIRSF RPS6e 13 261 IPR014401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1899 Mibi-ChrMibi10 42079340 42081448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1899 13 261 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 69.880 1.19e-117 333