Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1847 ATGAAGGATAAATTAAAGGGTTTCATGAAGAAAGTCTCTCAATCACCCTCCGGTAAATTCAAGGGTCAAGGAAGAGTTCTAGGATCATCCTCCTCTACCCAATCATCTTCATCTTCACCTTCACCATCTGCAAGTTCCAATCTTCTCCGTCCTCCGCAGAATTCGGCTCCAAAACCTAGTTCTTCATCGGCCAACTCTCGACCGATGCCCCAGAAAACGATCGATTCTGAGTTGAATAGGAAAGAAGGTTCGAGTAACTCCAATCCTGATCGCAAACCTGTGGATGGGTTTGACCCTTTTGATTCATTCATAACTACTGGGAAGAGATCTAAAAATGGGTATTCTTTGGATGTGTATGAATGTCCTATTTGTGGGCAATCGTTTAGGTCCGAGGAGGAGGTGTCTATACATGTGGATAGCTGTCCGGGTAATCCAGTTGAAGGTGATGGTGGAAATGGTGTTTCACAAATAGCTGACAGTGGAGATCAGTCAAGAGGTGAATTGGAGGCTTGCATCATTACTTATATGTCAGGGAAGCCATCTGAGGGCTCAGTTGAAGTTGTTCTCAGATTGCTGAGGAATATTGTAAAGGAACCAGATAATGCAAAGTACAGGAAAATTAGGTTGACTAATCCTAAGATAAAAGAGGCTATTAGTGAGGTTGCAGGAGGAATTGAGATGCTGAGCTGTGTAGGGTTTGAGCTAAAGGATGAGGATGGAGAGACATGGGCAGTGATGGAAGTTCCTACAGAAGAGCAGATAAAATTGATTAAGAAAGCAATAGCATTATTGGAGTCACCAATACTACAAGAACATGGAAAGAGAGACTGTTTGGCATCTGAAACATGTGCTGAGACGGTTGAAGTGGCAGAACCTAAAAAGGTGGACAGACAGGTAAAGGTCTTCTTTGCTGTACCAGAAAGCATTGCATCAAGGATTGAGCTTCCTGATTCTTTCTATAATCTTTCAATTGACGAGGTGAAAAGAGAAGCTGAATTAAGGAGGAAAAAAATTGCGGATTCTCAGCTTTTAATCCCCAAGTCACTAAAAGAAAAGCAAGCAAAAGCTGCTAGGAGGAAATATAGAAAAGCTATGATTCGGATCCAGTTTCCAGATGGAGTGGTCCTTCAAGGTGTATTTAATCCATGGGAACCAACAACTGCTTTATATGAGTTTACCAGCTCCGCATTGAAAGAACCATGTTTGGAATTTGACCTGATGCATCCTGTTCTTGTTCAACGACGGGTTATCCCTCATTTCCCTAGACCAGGGGAGAAAGCTGTTACACTAGAGGATGAGGACCTGGTGCCTTCAGCTCTTATTAAGTTGAAACCCCATGAAACGGATTCTATTGTATACACTGGCCTCAGAAATGAATTGCTTGAAATCAGTGAACCACTTTCATGA 1407 0.4236 MKDKLKGFMKKVSQSPSGKFKGQGRVLGSSSSTQSSSSSPSPSASSNLLRPPQNSAPKPSSSSANSRPMPQKTIDSELNRKEGSSNSNPDRKPVDGFDPFDSFITTGKRSKNGYSLDVYECPICGQSFRSEEEVSIHVDSCPGNPVEGDGGNGVSQIADSGDQSRGELEACIITYMSGKPSEGSVEVVLRLLRNIVKEPDNAKYRKIRLTNPKIKEAISEVAGGIEMLSCVGFELKDEDGETWAVMEVPTEEQIKLIKKAIALLESPILQEHGKRDCLASETCAETVEVAEPKKVDRQVKVFFAVPESIASRIELPDSFYNLSIDEVKREAELRRKKIADSQLLIPKSLKEKQAKAARRKYRKAMIRIQFPDGVVLQGVFNPWEPTTALYEFTSSALKEPCLEFDLMHPVLVQRRVIPHFPRPGEKAVTLEDEDLVPSALIKLKPHETDSIVYTGLRNELLEISEPLS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1847 468 MobiDBLite consensus disorder prediction 1 99 - -
Mibi10g1847 468 SUPERFAMILY PUG domain-like 180 265 IPR036339 -
Mibi10g1847 468 ProSiteProfiles UBX domain profile. 359 443 IPR001012 GO:0005515
Mibi10g1847 468 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 467 - -
Mibi10g1847 468 SMART PGNneu 183 250 - -
Mibi10g1847 468 CDD PUB 177 266 - -
Mibi10g1847 468 Pfam PUB domain 182 257 IPR018997 -
Mibi10g1847 468 Gene3D - 353 446 - -
Mibi10g1847 468 SUPERFAMILY Ubiquitin-like 331 443 IPR029071 -
Mibi10g1847 468 FunFam UBX domain-containing protein 6 353 444 - -
Mibi10g1847 468 MobiDBLite consensus disorder prediction 74 88 - -
Mibi10g1847 468 MobiDBLite consensus disorder prediction 16 73 - -
Mibi10g1847 468 Gene3D - 175 278 - -
Mibi10g1847 468 ProSiteProfiles Zinc finger CCHC NOA-type profile. 113 143 IPR034735 GO:0070530
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1847 1 391 C2H2 Transcription Factor Family AT2G01650 56.313 5.53e-149 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi10g1847 PUB 4.3e-19 No_clan