Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1833 ATGGACAAGCTTACCTTCAACCATTCCATATTATTGTTTCTCATCATTACTATTCACTCTTTCTTCATGGTTTTGCATGGCACTGAAGCTTCTTCCTTATCTTGCCACCATACTCCATACCCACACGTGTGCAACCACTATATGACCAGTACTAATACCCTCTCAACTTCATCTTCTTCTTCTTCTTTCCATGATATGGCTCTTAGGGTTACTTTGGACCAAGCCATTGAAGCTCATAAGCTTGTGTCAACCATGAAAACAAACAACCAGTACTTTAAGGATGATAGAGCCAGACAGGCCTGGACCGATTGCTTAGAGCTATATGAAGACACGGTTCACCAACTGAACCGGTCCGTTATGAGCTCGACAAACCTAAATGATAAACTCACATGGTTAAGTGCCTCCATTGCCAATCACCAAACATGCCAAAATGGCTTCCTTGACTTTAACCTTCACGAACACCTCAATTTCTTCCCAAACATGCTCACCAACTTCTCCAAACTCATAAGCAATTCCCTAGCCATTACAAATGCCATGGCCACATCATCATCACAAATTATTGATGATAATAATAATGGTAGCAGGAAGTTGTTGATGTCTGATGGATTATCATTCCCTGAGTGGGTTTCAGGGTCGGATAGGCGGCTTCTGACCGGGTTGGTGGGGCCCAGGGTGGACGTGGTTGTGGCGAAAGACGGGAGCGGGAACTATAAGACGATAATGGAAGGGGTGGAGGCGGCGAGTAAGATGGGAGGAGGGAGGAGGGTGGTGGTGCATGTGAAAGGGGGAGTGTATGAAGAGAATGTGGTGATTAAGAGGGGAATGAGGAATTTGATGATTGTTGGAGATGGTATTGGTGTTACCATTGTTTCTGGTAGCAAGAATGCTCAACATACCACCACTTTGGACTCTGCCACTTTTGCTGTTTCTGGAGACAACTTCATGGCTCGAGACATAACCTTCGAGAACACCGCCGGCCCCGAAGCCCACCAGGCGGTGGCCCTCCTCTCCGGTGCCGACCACTCAGTATTTTTCCGATGCAGTTTTAAGGGTTACCAAGACACTCTATACCTCCTCTCACAACGCCAATTCTACCGTGACTGTGACATTTATGGCACCATTGACTTTATCTTCGGTGACGCCGTCGCCGTCCTCCAAAACTGCAACATCTTCGTCAGAAAACCCATGAGCAACCAGCAAAACGCGGTGACGGCTCAGGGAAGATCCGACCCGAATGAGAACACCGGCATTATCCTCCACGGTTGCCGGATAACGGCATCGTCGGAGTTGAGGCCGGTGCAGGGAAATTTTAAGACTTTCCTTGGCAGGCCTTGGAAGGAGTACTCCAGGACGGTTGTTTTGAAGAGCAATTTGGATGGCGGGTTGATCCACCCGGCCGGGTGGATGCCTTGGAGCGGAAGTTTCGCCCTCAAGACACTTTATTACGGCGAGTTTATGAATACCGGCGGCGGAGCCGCCACCGGCGGGAGGGTGAAATGGCCCGGGTTTCACGTGATCACCAGCCCGGCGGAGGCCGGGAAGTTCACCGTCGGGAACTTCCTCGCCGGCAGGTCGTGGATCGCCGGGACCGGCGTGCCGTTCCAGGCAGGGTTGTGA 1617 0.5028 MDKLTFNHSILLFLIITIHSFFMVLHGTEASSLSCHHTPYPHVCNHYMTSTNTLSTSSSSSSFHDMALRVTLDQAIEAHKLVSTMKTNNQYFKDDRARQAWTDCLELYEDTVHQLNRSVMSSTNLNDKLTWLSASIANHQTCQNGFLDFNLHEHLNFFPNMLTNFSKLISNSLAITNAMATSSSQIIDDNNNGSRKLLMSDGLSFPEWVSGSDRRLLTGLVGPRVDVVVAKDGSGNYKTIMEGVEAASKMGGGRRVVVHVKGGVYEENVVIKRGMRNLMIVGDGIGVTIVSGSKNAQHTTTLDSATFAVSGDNFMARDITFENTAGPEAHQAVALLSGADHSVFFRCSFKGYQDTLYLLSQRQFYRDCDIYGTIDFIFGDAVAVLQNCNIFVRKPMSNQQNAVTAQGRSDPNENTGIILHGCRITASSELRPVQGNFKTFLGRPWKEYSRTVVLKSNLDGGLIHPAGWMPWSGSFALKTLYYGEFMNTGGGAATGGRVKWPGFHVITSPAEAGKFTVGNFLAGRSWIAGTGVPFQAGL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1833 538 CDD PMEI-like_3 33 181 - -
Mibi10g1833 538 Pfam Pectinesterase 226 523 IPR000070 GO:0030599|GO:0042545
Mibi10g1833 538 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Mibi10g1833 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 179 IPR035513 -
Mibi10g1833 538 Pfam Plant invertase/pectin methylesterase inhibitor 34 175 IPR006501 GO:0004857
Mibi10g1833 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 180 IPR035513 -
Mibi10g1833 538 SMART PMEI_2 26 175 IPR006501 GO:0004857
Mibi10g1833 538 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 179 IPR006501 GO:0004857
Mibi10g1833 538 SUPERFAMILY Pectin lyase-like 223 537 IPR011050 -
Mibi10g1833 538 Gene3D - 223 538 IPR012334 -
Mibi10g1833 538 PANTHER PECTINESTERASE 16 528 - -
Mibi10g1833 538 FunFam Pectinesterase 221 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1833 Mibi-ChrMibi10 41315317 41317717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1833 4 538 Carbohydrate Esterase AT1G23200 50.179 0.0 528