Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1831 ATGGACCAGCTTACCTTCAACCATTCCATATTACTGTTTCTCATCATCACTATTCACTCTTTCTTCATGGTTTTGCATGGCACTGAAGCTTCTTCCTTATCTTGCCTCCATACTCCATACCCACACGTGTGCAACCACTATATGAACAGTACTAATACCCTCTCAACTTCATCATCTTCTTCTTCTTTCCATGATATGGCTCTTAGGGTTACTTTGGACCAAGCCATTGAAGCTCATAAGCTTGTGTCAACCATGAAAACAAACAACCGGTACTTTAAGGATGATAGAGCCAGACAGGCCTGGACCGATTGCTTAGAACTATATGAAGACACGGTTCACCAGCTGAACCGATCCGTGAGCTCAACAAACCTAAATGACAAACTCACATGGTTAAGTGCCTCCATTGCCAACCACCAAACATGCCAAAATGGCTTCCTTGACTTCAACCTTCATGAACACCTCAATTTCTTCCCAAACATGCTCACCAACTTCTCCAAGCTCATAAGCAATTCCCTAGCCATTACAAATGCCATGTCCACGTCATCATCACAAATTCTTGATAATAACAATAATAATAATGGTGGGAGAAAGTTGTTGATGTCTGATGGGTTATCATTCCCTGGGTGGGTATCAGGGTCAGATAGGCGGCTTCTAGCCGGGTTGGTGGGACCCAGGGCGGACGTGGTTGTGGCAAAAGACGGGAGTGGGAACTATAAGACTATAATGGAGGGGGTGGAGGCGGCGAGTAAGATGGGAGGAGGGAGGAGGGTGGTGGTGCATGTGAAAGGGGGAGTGTATGAAGAGAATGTGGTGATTAAGAGGAAAATGAGGAATTTGATGATTGTTGGAGATGGTATTGGTGTTACCATTGTCTCTGGTAGCAAGAATGCTCAACATACCACCACTTTCAGCTCTGCCACTTTTGGTGTTTCTGGAGACAACTTCATAGCCCGAGACATAACCTTCGAGAACACCGCCGGCCCCGAAGCCCACCAAGCGGTGGCTCTCCGCTCCGGCGCCGACCACTCAGTATTTTTCCGATGCAGTTTTAAGGGATACCAAGACACTCTATACGTCTACTCACAACGCCAATTCTACCGTGACTGTGACATTTATGGCACCATTGACTTCATCTTCGGTGACGCCGCCGCCGTCCTCCAAAACTGCAACATCTTCGTCAGAAAACCCATGAGCAACCAGCAAAACACGGTGACGGCCCAGGGAAGATCCGACCCGAATGAGAACACCGGTATTATCCTCCACGGCTGCCACGTGGCGGCTTCGTCGGAGATGAGGCCGGTGCAGGGAAATTTTAAGACTTTCCTTGGCAGGCCATGGAAGGAATATTCTAGGACGGTTGTTATGAAGAGCGATTTGGACGGCGGGTTGATCCACCCGGCCGGGTGGATGCCTTGGAGCGGAAGTTTCGCCCTCAAGACGCTTTATTACGGCGAGTTTATGAATACCGGCGGCGGAGCCGCCACCGGCGGGAGGGTGAATTGGCCCGGGTTTCACGTGATCACGAGCCCGGCGGAGGCCGGGAAGTTCACCGTCGGGAACTTCATCGCCGGCGGGTCGTGGATCGCCGGCACCGGCGTGCCGTTCCAGGCGGGGTTGTGA 1620 0.5062 MDQLTFNHSILLFLIITIHSFFMVLHGTEASSLSCLHTPYPHVCNHYMNSTNTLSTSSSSSSFHDMALRVTLDQAIEAHKLVSTMKTNNRYFKDDRARQAWTDCLELYEDTVHQLNRSVSSTNLNDKLTWLSASIANHQTCQNGFLDFNLHEHLNFFPNMLTNFSKLISNSLAITNAMSTSSSQILDNNNNNNGGRKLLMSDGLSFPGWVSGSDRRLLAGLVGPRADVVVAKDGSGNYKTIMEGVEAASKMGGGRRVVVHVKGGVYEENVVIKRKMRNLMIVGDGIGVTIVSGSKNAQHTTTFSSATFGVSGDNFIARDITFENTAGPEAHQAVALRSGADHSVFFRCSFKGYQDTLYVYSQRQFYRDCDIYGTIDFIFGDAAAVLQNCNIFVRKPMSNQQNTVTAQGRSDPNENTGIILHGCHVAASSEMRPVQGNFKTFLGRPWKEYSRTVVMKSDLDGGLIHPAGWMPWSGSFALKTLYYGEFMNTGGGAATGGRVNWPGFHVITSPAEAGKFTVGNFIAGGSWIAGTGVPFQAGL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1831 539 PANTHER PECTINESTERASE 16 529 - -
Mibi10g1831 539 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 178 IPR006501 GO:0004857
Mibi10g1831 539 Pfam Pectinesterase 227 524 IPR000070 GO:0030599|GO:0042545
Mibi10g1831 539 FunFam Pectinesterase 222 539 - -
Mibi10g1831 539 Pfam Plant invertase/pectin methylesterase inhibitor 34 174 IPR006501 GO:0004857
Mibi10g1831 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 179 IPR035513 -
Mibi10g1831 539 SUPERFAMILY Pectin lyase-like 223 538 IPR011050 -
Mibi10g1831 539 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
Mibi10g1831 539 CDD PMEI-like_3 33 180 - -
Mibi10g1831 539 Gene3D - 224 539 IPR012334 -
Mibi10g1831 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 178 IPR035513 -
Mibi10g1831 539 SMART PMEI_2 26 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1831 Mibi-ChrMibi10 41300909 41303338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1831 4 539 Carbohydrate Esterase AT1G23200 51.429 0.0 538