Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1823 ATGTTTGCCTTAACCATCCCAACACCGTTTAAACTGAGAACTTGGCATTTCGTAGTACTTCCACCAAACACCAACTTTGAATTCTTCCCAACTGGAAGCAGAGTATACAGGAGAAGCAGGGGATCAGCTTATTCTAAATTAGCCCATGAAAGCTTATGTCTTTACTCGAAATCGAACACTAGACCTATAGTAGCCTCGAGGGTCAGTAATGGCGATGACGTCGCTTTTGATGCTACTTCACTACAGTCTTCCACTCCTCCTTCTGACGTCGGAGAAGTAAAAAACACCACTTCCAGCCTTGGTGAAGGTTATGTGGCCTTGTTTGTTCGAATGTTAGGCTTAGATCATGATCCTCTTGATAGAGAACAGGCTATAATAGCTCTGTGGAAATATTCACTTGGCGGAAAGCAGTGTGTTGATGCTTTAATGCGATTTCCTGGCTGTATTAATCTTACTGTGAACCTCCTCAGATCAGATTCAAGTTTTTCATGTGAAGCAGCTGCAGGCCTTTTGCGATCTCTATCTTCAGTCAATCTATACAGGAATTTGGTAGCAGAGAGCGGAGCAATAGAAGAGATTAATAGACTGCTGAGGAAGTCTTCATTGGATCGTGAGGTAAAGGTGCAGAGTTTGAGTACATTGTGGAATTTATCTGTGGATGAGAAGCTCCGTATTAGACTTGCAAAGAGTGATATCCTGCCATTGATTATAAAGTACCTTGAAGACAAGGACCTACAAGTAAAGGAAGCTGCGGGAGGCATATTGGCAAATTTAGCTTTGAGTCATGTTAACCACAGCATTTTGGTTGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACTTCTTATTCTGAAGGATCCAAAGTCATTAGAAAGGAAGCACAGAATGCACTGCTGGAATTTGTCAAGGATGGATATTATAAAATTCTTGTCGTTGAGGAAGGTCTGGTTCCTGTGCCATTGATTGGTGCTGAGGCCTACAAGTCATTCTCCCCTGATTTGCATTCGTGGCCCAAATTACCAGATGGCACAGAAATTGAACGGGCTCCTCTAAAACCTTCCAGGTATGGTGCATCAGAAGCACTTCTTGGACTTAATTTCGATCCTAAGAGTGCTAACTTAGAGGAAGCAAAAGTGAATGCCATTGTGGGACGGGCACAACAAGAATTCCTTGTTCGTATTGGGGCAATAGAAGTGGAAGGGAAAAACACCTCTGATGATTCGAAAAGCTCTGATAGGCAGCAACTTACACTTTTACCTTGGAGGGATGGTGTTGCTCGCTTGGTACTTATTCTAGAACTAGAAGACAAGTCTGCCATAAAAAGGGCTGCAGAGTCAATAGCTGATGTATCTGTCAATGAGCATCTGCGCATTGCATTCAAGGAGGCTGGAGCTGTTAAGCATTTAGTTCGGCTTTTGAATTGTGATGATGATGCTGTCAGATTGGCTGTAACCCAAGCTTTGGAAAGGTTGTCCTCCAGCTATGTAGTCTGCCAGAAAATTGAATCTGAGGGAGTGTTAGGTCCTTTGATTGATATTCTAAAATGCTCAGAGATTTCTGAAACTATGGCAGAAAAGTCTTTAAATACAATTGCTCGCATACTAGACCCTAGTAAAGAGATGAAATTGAAGTTTTGTGATGGACCGGTTAATGGATCTGAGAAGGCCCTGGGTGGAGTTAGAAATGGTGCTGTTTCAGCTAGCTTTAATACAGCTGAATTTCCAACATCAAAGACCACTACCAGGAATGATGTATTGGACTCTGCTTTTGTGGCCCGCCTTGCTGAGATTCTGAAGTCCTCTTCGCCCAGTTTACAAGAAAAAGCTGCATCAGTTCTCGAGTTTGTTGCATTGACTGACCCCACTATGGTCTCTATTATATCTGTAGATATTGAATCAGCTCTCAATGATGTCTTTCAGCAAAAAAATTTGAAAATTTCAGGTGGAGAACCTGATGTAGAAGATCAAGTTTCAGAAGCATACCCGATTGAAGTTGAAGAAGCCGGGCTTGCCATATCAGCAGCATCCCGGTTAATGACACGACTGCTCGACTGTCAGCATTTTCGCAACAAAGTAAATTCCTCCAATTTCATCAGCTTGCTTCGAAAAATCCTCAAGTCTTGTATCCCCCTTCACAGCAAAGATTGGGTGGCTGCATGCCTAGTTAAACTCAGTTCTCTCTCTAGTGACAACCCAAGTGTTGATCCAATCAATATGGAAGTTACAGTTTATGAGACAATCCCAAGACTCATTGAACAGATAAAAACTTCCTCTTCTTTGGAAGCACAGGAAGCTGCTGTTGTAGAACTGAACAGAATAATATCAGAAGAAGTGGTGGATTCTGCTAGAGCTATTGTGTCTGAGGGGGCAATATACCCATTGGTGAAGCTGATAGAAGAAGGAAGTGAACGGGCCATTGAAGCAGGATTAGCTATATTGTATAATCTGAGCATGGACCCTAAGAACCATTCAATGATTGTGGCTGCTGGAGCGGTTCCCGTATTGAGAAGGATTGTACTCTCTCAAAGGCCACAATGGGAAAAGGCACTTCACTTACTCAGGAATTTGTGA 2574 0.4246 MFALTIPTPFKLRTWHFVVLPPNTNFEFFPTGSRVYRRSRGSAYSKLAHESLCLYSKSNTRPIVASRVSNGDDVAFDATSLQSSTPPSDVGEVKNTTSSLGEGYVALFVRMLGLDHDPLDREQAIIALWKYSLGGKQCVDALMRFPGCINLTVNLLRSDSSFSCEAAAGLLRSLSSVNLYRNLVAESGAIEEINRLLRKSSLDREVKVQSLSTLWNLSVDEKLRIRLAKSDILPLIIKYLEDKDLQVKEAAGGILANLALSHVNHSILVEAGVIPKLAKFLTSYSEGSKVIRKEAQNALLEFVKDGYYKILVVEEGLVPVPLIGAEAYKSFSPDLHSWPKLPDGTEIERAPLKPSRYGASEALLGLNFDPKSANLEEAKVNAIVGRAQQEFLVRIGAIEVEGKNTSDDSKSSDRQQLTLLPWRDGVARLVLILELEDKSAIKRAAESIADVSVNEHLRIAFKEAGAVKHLVRLLNCDDDAVRLAVTQALERLSSSYVVCQKIESEGVLGPLIDILKCSEISETMAEKSLNTIARILDPSKEMKLKFCDGPVNGSEKALGGVRNGAVSASFNTAEFPTSKTTTRNDVLDSAFVARLAEILKSSSPSLQEKAASVLEFVALTDPTMVSIISVDIESALNDVFQQKNLKISGGEPDVEDQVSEAYPIEVEEAGLAISAASRLMTRLLDCQHFRNKVNSSNFISLLRKILKSCIPLHSKDWVAACLVKLSSLSSDNPSVDPINMEVTVYETIPRLIEQIKTSSSLEAQEAAVVELNRIISEEVVDSARAIVSEGAIYPLVKLIEEGSERAIEAGLAILYNLSMDPKNHSMIVAAGAVPVLRRIVLSQRPQWEKALHLLRNL 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1823 857 Gene3D - 667 857 IPR011989 -
Mibi10g1823 857 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 188 221 IPR000225 GO:0005515
Mibi10g1823 857 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 790 832 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 261 304 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 734 776 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 220 260 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 454 494 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 176 219 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 779 819 IPR000225 GO:0005515
Mibi10g1823 857 SMART arm_5 579 619 IPR000225 GO:0005515
Mibi10g1823 857 SUPERFAMILY ARM repeat 108 323 IPR016024 -
Mibi10g1823 857 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 70 857 - -
Mibi10g1823 857 SUPERFAMILY ARM repeat 428 846 IPR016024 -
Mibi10g1823 857 Pfam Armadillo/beta-catenin-like repeat 454 494 IPR000225 GO:0005515
Mibi10g1823 857 Gene3D - 92 325 IPR011989 -
Mibi10g1823 857 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 231 273 IPR000225 GO:0005515
Mibi10g1823 857 Gene3D - 410 648 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1823 Mibi-ChrMibi10 41216472 41222083 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1823 155 320 U-box Gene Family AT5G67340 29.940 3.23e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1823 10 41216472 41222083 Mibi10g1823 10 41216472 41222083 ECH