Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1794 ATGTCTGATTCATCCGATGTCTTCAAGCTTCACCCTCCCACTACTCCAAATTCCACCCTTAATTCTCACCCACCCACCAAAATCATTCCTTTCTGTATTTGCACCCACTGCACCAATCTCATCTCTTTGAAGCATCATCTCGGGGAGGAAGGAGCAAGTGCAAGTAGGCAATCTCAGCAAAGTTCAAGTTCAAGGTGGAGTCCAACGCCGGCACAGTTACTGGTGCTAGAAGAAATGTACAGGCAAGGGACGAAGACGCCAACGGCTGAACAAATACAGCAAATAGCTTCTCAACTACGTCGTTTTGGGAAGATAGAAGGCAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCTAGAGAGAGACAGAAACGACGTCGCCTTGAGATGGAGGAGGCTGCTTCTGATTCTGCTGAAGACAAGGAGGTGTACCTTGTTCATGTCAAAAGCTCACAAGAAGAGCAACACTCTAATTCAGGTACGGATACACCTACAGAGACAAGTTGTACTCTCTTGAATTTTATTTCATTGATTTCTGTGTGGGAGGACTAA 552 0.4547 MSDSSDVFKLHPPTTPNSTLNSHPPTKIIPFCICTHCTNLISLKHHLGEEGASASRQSQQSSSSRWSPTPAQLLVLEEMYRQGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRLEMEEAASDSAEDKEVYLVHVKSSQEEQHSNSGTDTPTETSCTLLNFISLISVWED 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1794 183 ProSiteProfiles 'Homeobox' domain profile. 59 124 IPR001356 GO:0003677
Mibi10g1794 183 SMART HOX_1 61 128 IPR001356 GO:0003677
Mibi10g1794 183 Pfam Homeodomain 63 123 IPR001356 GO:0003677
Mibi10g1794 183 FunFam WUSCHEL-related homeobox 11 63 130 - -
Mibi10g1794 183 SUPERFAMILY Homeodomain-like 60 127 IPR009057 -
Mibi10g1794 183 MobiDBLite consensus disorder prediction 1 22 - -
Mibi10g1794 183 CDD homeodomain 69 125 IPR001356 GO:0003677
Mibi10g1794 183 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 50 160 IPR044555 GO:0003700|GO:0099402
Mibi10g1794 183 Gene3D - 54 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1794 Mibi-ChrMibi10 39254959 39255874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1794 63 127 Wox Gene Family AT3G18010 83.077 1.08e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mibi10g1794 Homeodomain 6.5e-20 CL0123