Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1776 ATGACTCTTACAGGTCTGGTTTCACTGGTGTTCGATTTCATTGGTCTTGTTCCACATTGCAAGATCAATCATCAGAAGAAGCAGGCAACTTCAAGCGAATCATCAAGGTTGATCGAAGTTGATTGGTGTTGTGTTTGTTTGTCGGGGTTAAAGGAAGAAGATGAGACGAAGATTCTTCCTTGTTTTCACAGATTCCATAAACCTTGTGTAGATAAATGGCTCAATATTAAGCAGGGTCGTCACAAAACATGTCCTCTGTGTCGTTTCTCTATGGTGGCAGAAGATCAGAATAATAATAATATGTCTCTTCTTGCTTCTTCTGAAGAATTCACTGAGGATATGCTTGACCCTGTTCATATGGAAATTATTTGGCCCCATAACTTGTGCTATTGGTGA 396 0.3965 MTLTGLVSLVFDFIGLVPHCKINHQKKQATSSESSRLIEVDWCCVCLSGLKEEDETKILPCFHRFHKPCVDKWLNIKQGRHKTCPLCRFSMVAEDQNNNNMSLLASSEEFTEDMLDPVHMEIIWPHNLCYW 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1776 131 Pfam Ring finger domain 42 88 IPR001841 -
Mibi10g1776 131 PANTHER TARGET OF ERK KINASE MPK-1 24 94 - -
Mibi10g1776 131 SUPERFAMILY RING/U-box 36 95 - -
Mibi10g1776 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 107 IPR013083 -
Mibi10g1776 131 ProSiteProfiles Zinc finger RING-type profile. 43 88 IPR001841 -
Mibi10g1776 131 SMART ring_2 43 87 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1776 Mibi-ChrMibi10 39091771 39092528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1776 43 95 C3H Transcription Factor Family AT5G45290 47.170 8.98e-12 59.3