Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1775 ATGGAGGCTGATACTTTTGATACATTGAGTTCTTCCCCATCATCATCATCATCATCATCTTACTACACTATTCTCGGTGTCGATTCGGATTCCTCTCTTGAGGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAATGGCATCCGGATAGGTGGGCGAGAACACCTTCTCTGCTTGGAGAAGCAAAAAGAAAGTTCCAGCAAATTCAGGAAGCCTATTCAGTATTATCGGACCAAAACAAAAGAACTGTGTACGATGCAGGCTTGTACGATCCCCAAAAAGAAGAGGATGAGGGGTTTTGTGAGTTTGTGCAAGAGTTGATGACCCAAGTGAGCAGAGAGGAGAGAGAATATAGTATAGAGGAGTTGCAGAGCATGCTAATGGAAATGGCTCAAGGATTCGATGATACTTCTTGGCAATTTGGAGCATCATCCATGGATGATGAAAGCCATTGCTCAAAGAGGGCTCGTCTGGATTCAAACTTGAACATGAATTTAGGGTCATCTTTTCATCAGCCTGCCTTTCATTTGTATGAAACCAGAGGCTACTGTAGTTAG 558 0.4355 MEADTFDTLSSSPSSSSSSSYYTILGVDSDSSLEEIRRAYRKLAMQWHPDRWARTPSLLGEAKRKFQQIQEAYSVLSDQNKRTVYDAGLYDPQKEEDEGFCEFVQELMTQVSREEREYSIEELQSMLMEMAQGFDDTSWQFGASSMDDESHCSKRARLDSNLNMNLGSSFHQPAFHLYETRGYCS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1775 185 PRINTS DnaJ domain signature 40 55 IPR001623 -
Mibi10g1775 185 PRINTS DnaJ domain signature 22 40 IPR001623 -
Mibi10g1775 185 PRINTS DnaJ domain signature 61 81 IPR001623 -
Mibi10g1775 185 Coils Coil 104 124 - -
Mibi10g1775 185 CDD DnaJ 21 78 IPR001623 -
Mibi10g1775 185 SUPERFAMILY Chaperone J-domain 17 92 IPR036869 -
Mibi10g1775 185 MobiDBLite consensus disorder prediction 1 21 - -
Mibi10g1775 185 SMART dnaj_3 19 81 IPR001623 -
Mibi10g1775 185 ProSitePatterns Nt-dnaJ domain signature. 66 85 IPR018253 -
Mibi10g1775 185 PANTHER PUTATIVE, EXPRESSED-RELATED 15 144 - -
Mibi10g1775 185 Gene3D DnaJ domain 7 110 IPR036869 -
Mibi10g1775 185 ProSiteProfiles dnaJ domain profile. 20 89 IPR001623 -
Mibi10g1775 185 Pfam DnaJ domain 21 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1775 Mibi-ChrMibi10 39087310 39088742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1775 11 87 C2H2 Transcription Factor Family AT1G74250 42.308 5.93e-13 64.3