Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1767 ATGTCGGCCAACGGCGATTCTCCGCCGCCGCCGCCGCCGACAACCTACCTTCACGGCGACCTCGAGTTAACCATCTTCGAGGCCAGAAACTTGCCCAACATGGATTTCATCTCCGAGCATTTCCGCCGTTGTTGCGTCACCGCATGTGACACTATCAAATCCCATCCCTCCGGCGACAAAACCCGCCGCCACCGCCGCCGGAGGCTCATCACCAGCGACACCTACGTCACCGTCTCTGTCCCACAGTCCACCGTTGCTCGCACACGTGTGATTAAGAACGTGCCAAACCCTCAGTGGAATGAGCGATTCACTATACCGTTGGCTCATCCGGCGGAGAATTTGGAGTTTCGAGTTAAAGACGACGACGTTTTTGGTGCTCAGCTTGTAGGAACAGTGAATATTCCGGCAGAGAGGGTTGTTTCCGGTGAGGTTATCTCCGGGTGGTTTCCTATTCTTGCTTCTAACGGTAAGCCTCCAAAGCCTGAAACTGCTCTTCGTATAGAAATGAAGTTTGTTTCTGTTGAAGATAATGTATTGTATCGGCGAGGTATTGCGGCTGATCCGGAGCATAAGGGTGTGGGGAAGACGTATTTTCCTGTGAGGAAGGGAAGTTCTGTGAGGTTGTACCAAGATGCACATGTTCCTGATGGTATTTTACCTGAGATAAAGCTTGAGGGGGGTGAGGTTTATAGGCAGGGGAAGTGTTGGGAGGATATTTGTTATGCTATATCTGAGGCTCATCATATGGTTTATCTTGTGGGTTGGTCGATTTACCACAAGGTGAGGATTGTGAGAGAACCTAGTAGGCCTTTGCCAAGAGGTGGGGATTTGACTCTTGGTGAATTGCTCAAGTATAAATCTGAAGAAGGGGTGAGAGTTCTCATACTGATTTGGGATGATAAGACTTCCCATGATAAGTTGTTCTTCAAGTCGGCTGGAGTAATGCAGACGCATGATGAAGAAACCAGGAGATTTTTTAAACATTCTTCTATTATGTGTGTTCTTGCACCTCGGTATGCTAGCAGCAAGTTGAGTTATATGAAGCAACAAGTTGTTGGAACTGTTTTCACACATCACCAGAAATGCGTCCTTGTGGATACGCAGGCCTTTGGTAATAACCGTAAGATAACTGCTTTTTTAGGAGGCCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATAGACTTTTTCGTGATCTTGATACTGTATTTTCGGGTGATTTTCACAATCCCACGTTTGCAGCTGGAACAAGGGCTCCTAGGGAACCATGGCATGATATGCACTGCAGAATTGATGGACCTGCTGCATATGACGTTCTTCTTAATTTTGAGCAGCGTTGGAGAAAAGCAACAAAGTGGAGAGAGTTTGGAATAATTTTCAAAAAGGCTTCCCATTGGCATGATGATGCTTTATTGAAAATAGAACGCATTTCATGGATATTAAGTCCTTCCTTTCCTCGCTCAAAGGATGGTAGCACAATTGTTCCAGGAGATGATTCTTTACTATTTGTCAACAACGAAGATGATCCTGATAACTGGCACGTTCAGATATTCCGCTCCATTGACTCAGGATCCCTGAAAGGGTTTCCGAAAACTGTTGATGTTGCTTTGTCCCAGAATCTTACTTGCGCTAAAGATTTAGTAATAGATAAAAGCATTCAAACAGGATACATTCAAGCGATCAGATCGGCTCAACACTTTATCTATATTGAAAACCAATATTTTATTGGATCATCATATGCTTGGCCATCTTATAAGGATGCAGGAGCTGATCATATCATTCCAATGGAACTGGCACTCAAAATTGTTAGTAAAATCAGAGCCAAGGAGAGATTTGCAGTGTACATTGTTATACCAATGTGGCCAGAGGGTGATCCTAATTCGGCGGCTATGCAAGAAATCCTCTTTTGGCAGAACCAGACAATGCAAATGATGTATGATGTTGTTGCGAGAGAATTAAAATCAATGGACCTAGTTGATTTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAACCGAGAAGAATTCCATGAAGAAGACTCAAGTTCAAATGGTGCTTCGGTCTCCGGTTCGTACAAACATCGCCGATTTATGATTTATGTGCACGCTAAGGGGATGGTTGTTGATGATGAGTACGTTATCATGGGATCTGCTAATATAAACCAAAGGTCTATGGCGGGGACAAAAGATACTGAGATAGCTATGGGTGCATATCAACCTCATCACACTTGGTTTGCTAAGAAAAGACATCCGTATGGTCAGATTTATGGGTACAGAATGTCATTGTGGGCAGAGCATCTTGGGTTGTTAGACACAGATTTTGAAGAACCAGAGAGTTTGGAATGTGTGCGTAAGGTGAATTCCATTGCAGAAGAGAATTGGAGAAGATTTACGTCAGAGGATTTCTCAGTATTGCAGGGACATATTCTCAAGTATCCTGTACAAGTAGATGCTGATGGGAAGGTTAGCCCTTTGCCTGGATATGAGACTTTTGTGGATGTTGGCGGAAAAGTAATGGGATCTCATGCCCCCACAATTCCTGATATTTTAACAACTTAG 2568 0.4424 MSANGDSPPPPPPTTYLHGDLELTIFEARNLPNMDFISEHFRRCCVTACDTIKSHPSGDKTRRHRRRRLITSDTYVTVSVPQSTVARTRVIKNVPNPQWNERFTIPLAHPAENLEFRVKDDDVFGAQLVGTVNIPAERVVSGEVISGWFPILASNGKPPKPETALRIEMKFVSVEDNVLYRRGIAADPEHKGVGKTYFPVRKGSSVRLYQDAHVPDGILPEIKLEGGEVYRQGKCWEDICYAISEAHHMVYLVGWSIYHKVRIVREPSRPLPRGGDLTLGELLKYKSEEGVRVLILIWDDKTSHDKLFFKSAGVMQTHDEETRRFFKHSSIMCVLAPRYASSKLSYMKQQVVGTVFTHHQKCVLVDTQAFGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFAAGTRAPREPWHDMHCRIDGPAAYDVLLNFEQRWRKATKWREFGIIFKKASHWHDDALLKIERISWILSPSFPRSKDGSTIVPGDDSLLFVNNEDDPDNWHVQIFRSIDSGSLKGFPKTVDVALSQNLTCAKDLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADHIIPMELALKIVSKIRAKERFAVYIVIPMWPEGDPNSAAMQEILFWQNQTMQMMYDVVARELKSMDLVDLHPQDYLNFYCLGNREEFHEEDSSSNGASVSGSYKHRRFMIYVHAKGMVVDDEYVIMGSANINQRSMAGTKDTEIAMGAYQPHHTWFAKKRHPYGQIYGYRMSLWAEHLGLLDTDFEEPESLECVRKVNSIAEENWRRFTSEDFSVLQGHILKYPVQVDADGKVSPLPGYETFVDVGGKVMGSHAPTIPDILTT 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1767 855 FunFam Phospholipase D delta 226 470 - -
Mibi10g1767 855 Pfam C2 domain 19 151 IPR000008 -
Mibi10g1767 855 Gene3D Endonuclease Chain A 225 469 - -
Mibi10g1767 855 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 175 IPR035892 -
Mibi10g1767 855 SUPERFAMILY Phospholipase D/nuclease 197 459 - -
Mibi10g1767 855 PIRSF PLD_plant 12 855 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi10g1767 855 Pfam Phospholipase D C terminal 775 844 IPR024632 -
Mibi10g1767 855 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 700 727 IPR001736 GO:0003824
Mibi10g1767 855 CDD C2_plant_PLD 16 172 - -
Mibi10g1767 855 Gene3D Endonuclease Chain A 523 748 - -
Mibi10g1767 855 PANTHER PHOSPHOLIPASE D 15 844 IPR015679 -
Mibi10g1767 855 SUPERFAMILY Phospholipase D/nuclease 550 785 - -
Mibi10g1767 855 ProSiteProfiles C2 domain profile. 6 149 IPR000008 -
Mibi10g1767 855 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 389 IPR001736 GO:0003824
Mibi10g1767 855 Pfam PLD-like domain 559 738 IPR025202 -
Mibi10g1767 855 SMART C2_3c 20 148 IPR000008 -
Mibi10g1767 855 Gene3D C2 domain 17 180 IPR035892 -
Mibi10g1767 855 Pfam Phospholipase D Active site motif 354 389 IPR001736 GO:0003824
Mibi10g1767 855 SMART pld_4 354 389 IPR001736 GO:0003824
Mibi10g1767 855 SMART pld_4 700 727 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1767 Mibi-ChrMibi10 38981336 38987282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1767 17 691 Phospholipase D Gene Family (Wang group) AT4G35790 68.950 0.0 1000