Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1758 ATGGAGATCATCGACGACGACGACGCTGCTGAGAGCTGCGCCAGTCGATCCGTACAGTCAATGACACCTCATCCTCGTCATCACGGACAGAAATTGGAGGTCTACAATGAGGTCCTCCGTCGAATTCGACATTCCAATCATGAGGAGGCCAATATTCCTGATTTTGATGATCAATTATGGCTTCACTTTAATCGTCTTCCTGCTAGGTACGCTTTCGATGTGAATGTGGAGAGGGCGGAGGACGTTCTTGTTCATATGAAATTGCTGAATTTGGCAGAGGACCCTGCTAATGGACCTGCACTTCAAGTTCGCTTAGTACAGGTACAACCCTCTGGCAGTGAAAATTATGGTGACTCTATGCACTCAGATCCCTCTGAGAATGAAGATGCCCAGAGCTCTTTTAAGCAGGGAACTCATCTGCCACCTACGTTCGGTTCATCCTCTAATCTTGAAGCTCTTTCACGTAAAAGAAGTAAAATTAATATTGAAGATGTGGACGGTGCTATGGATGAAACACCAAATTCTTTCCAGCCCATGCATGAGATTACTTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACTGCGTTACTTAGCGAGATTGGATTGAACATTCAAGAAGCTCATGCATTTTCCACCAATGATGGCTTTTCTCTTGATGTGTTTGTTGTTGATGGTTGGCCTAATGAGGATTCGGAGGAGCTCAAAGCTGTATTGGAACAAGAAATTTTGAAATTTAAGGAGAAATATCTGTCAAAACAGGGCACGCATTATGCTGCCAATGAGGATAATCAGGAAAGGATGGAACCCTTTCCTCCTTGCATAGAAATACCATCTGATGGCACTGATGTCTGGGAAATTAATACCAACCTGTTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAAAGGCACATACTGCAGTCAACTTGTGGCTATCAAAGTCCTCAAACCTGAGCGCACAAATACAGATATGTTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAGGAATGTTGTGCAATTCATTGGAGCATGTACTCGACCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCCTATATGACTATCTGCACAAACAAAGAGGTGTGCTTAAGCTTCCATCTTTGCTAAAAGTGGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATACACAGGGACCTCAAGACTGCCAATCTGCTGATGGATGAAAATGAAGTTGTGAAAGTTGCTGATTTTGGGGTTGCCAGAGTGAAGATGCAATCTGGAGTGATGACGGCTGAAACTGGAACTTACCGTTGGATGGCTCCAGAGATCATTGAACACAAACCTTACGACCAGAAAGCAGATGTCTTTAGTTTTGGAATAACTCTTTGGGAGCTTCTAACCAGAGAACTGCCTTACTCACTCTTGACTCCATTACAAGCAGCAGTAGGCGTCGTGCAAAAGGGTCTGAGACCTACAATCCCTAAGAACACACACCCAAGACTTTCTGAACTTCTCCAACGTTGCTGGCAACAAGATCCAAAAGATAGACCAGAATTCTCCGAAATAATAGAGATTCTTCAGCTGATAGCTAAAGAGGTTGTTGATGAAAAAGCTGATCATCACAAAGATAAATCGCCTCACGGCTTTCTGTCAGCACTTAAATGGGGCCATCACTGA 1728 0.4282 MEIIDDDDAAESCASRSVQSMTPHPRHHGQKLEVYNEVLRRIRHSNHEEANIPDFDDQLWLHFNRLPARYAFDVNVERAEDVLVHMKLLNLAEDPANGPALQVRLVQVQPSGSENYGDSMHSDPSENEDAQSSFKQGTHLPPTFGSSSNLEALSRKRSKINIEDVDGAMDETPNSFQPMHEITFSTVDKPKLLSQLTALLSEIGLNIQEAHAFSTNDGFSLDVFVVDGWPNEDSEELKAVLEQEILKFKEKYLSKQGTHYAANEDNQERMEPFPPCIEIPSDGTDVWEINTNLLKFENKVGSGSFGDLYKGTYCSQLVAIKVLKPERTNTDMLKEFAQEVYIMRKIRHRNVVQFIGACTRPPNLCIVTEFMSRGSLYDYLHKQRGVLKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVKMQSGVMTAETGTYRWMAPEIIEHKPYDQKADVFSFGITLWELLTRELPYSLLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPKDRPEFSEIIEILQLIAKEVVDEKADHHKDKSPHGFLSALKWGHH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1758 575 CDD ACT_TyrKc 179 246 - -
Mibi10g1758 575 Gene3D Phosphorylase Kinase; domain 1 283 372 - -
Mibi10g1758 575 Pfam Protein tyrosine and serine/threonine kinase 294 543 IPR001245 GO:0004672|GO:0006468
Mibi10g1758 575 SMART serkin_6 294 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1758 575 Gene3D Transferase(Phosphotransferase) domain 1 373 566 - -
Mibi10g1758 575 MobiDBLite consensus disorder prediction 111 152 - -
Mibi10g1758 575 ProSiteProfiles ACT domain profile. 181 261 IPR002912 -
Mibi10g1758 575 MobiDBLite consensus disorder prediction 1 28 - -
Mibi10g1758 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 133 553 - -
Mibi10g1758 575 SUPERFAMILY ACT-like 179 243 IPR045865 -
Mibi10g1758 575 Coils Coil 231 251 - -
Mibi10g1758 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Mibi10g1758 575 ProSiteProfiles Protein kinase domain profile. 294 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1758 575 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Mibi10g1758 575 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Mibi10g1758 575 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Mibi10g1758 575 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Mibi10g1758 575 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Mibi10g1758 575 ProSitePatterns Protein kinases ATP-binding region signature. 300 321 IPR017441 GO:0005524
Mibi10g1758 575 CDD STKc_MAP3K-like 300 543 - -
Mibi10g1758 575 FunFam Serine/threonine-protein kinase isoform 1 284 372 - -
Mibi10g1758 575 SUPERFAMILY Protein kinase-like (PK-like) 272 543 IPR011009 -
Mibi10g1758 575 FunFam serine/threonine-protein kinase HT1 373 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1758 Mibi-ChrMibi10 38883626 38890187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1758 7 574 MAP Kinase Kinase Kinase AT4G35780 67.776 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi10g1758 PK_Tyr_Ser-Thr 3.6e-75 CL0016