Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1748 ATGCAGAGAATATGGCTTCTTGTGCTTGTGATTTTCTACTGCGGCATTCATTCAAACGGACTAAATGGTGTTCCTGCAAGACCCGACTCCGTAAACATAGGGGCAATTCTGTCATTCAATTCAACCATTGGAAAAGTGGCAAAAGTTGCAATTGATGCAGCAAAGGATGATATAAACTCCAATTCTTCACTTCTTAATGGGACTAAACTCAATATTTCTTTCCAGGACACCAAATTCTCCACTGGTTTTCTCGGCATCATTGATTCATTACTACTGATGGAGAACAACACAGTGGCTATAATTGGCCCTCAATACTCAGTGATGGCTCATGTGATTTCTCACATAGCCAATGAACTACAAGTACCATTGCTATCATTTGCAGCAACAGATCCTACCCTGACTTCTCTTCAATTCCCTTATTTTGTTAGAACATCACAGAGTGATCGGTTTCAGATGGCTGCCGTGGCAGATATCGTGGACTACTACCAATGGAAAGATGTCATAGCAATCTACATTGATGATGATCACGGAAGAAATGGGATTGTTTCATTAGAGGATGAGCTAGCTGAGAAAAGTTGTAAGATCTCATATAAAGCCCCTCTTACGCCTAATAACATAAACAGAGAAGAAATAAACAGTGCTTTAGTTAAGGTCATTATAAGGGAATCTAGGGTCATAGTACTCCATATATATCCTAGTTTTGGTTTAGATGTGCTTAAGGTTGCAAAGTCATTAGGCATGCTGGGGAGTGGGTATGTCTGGTTGGCCACTGATTGGCTTTCTACAGTACTAGATACTGATCCATCTAGGTCATCTTCATATATGAATGATCTTCAAGGTGTTATAACCTTGAGAATGTACACACCTGATTCTGGAATGAAAAAGAATTTCACTTCCAGGTGGAGTAATTTAACAAAGGAGAAAGCTCTTGATCAGAGTCCTTTCATGTGGAACACTTATGGGCTTTATGCCTATGACACTGTTTGGGTACTTGCATATGCACTTGATTCATTTTTCAATAGTGGAGGCACTTTATCATTTACAAATGATTCAAGTCTGAACAAACTGGTGGGTGATAGATTGGGCCTAAATTCTGTGGGGGTATTTGCTAATGGTAGTTTATTGATGGAAGACATTATGAAGGTGAATAGAAGCGGTTTAACAGGTCAAATAATGTTTAGTTCAGACGGTGAGTGTATGAATCCTGCTTATGAGATCATAAATGTTATTGGTACTGGGGTTAGGAGGATTGGTTTTTGGTCTAATTCCTCTGGTTTACACACTGGACAAGAAGCACCTAGTCATTCAAGCTCAAGTAAAGGACTTTATGGTGTGATATGGCCTGGCCAAACTACTGCAACGCCTCGGGGTTGGGTTTTTGCCAACAATGGGAGGCGTCTGCGAATTGGGGTGCCTCTCAGGATTAGCTACCGTGAATTCGTGTCAAGAATCGAAGGATCCGAAATGGTTGAAGGTTATTGTATAGATATTTTCAAAGCTGCAGTGGACTTGTTGCCTTATCCAGTTCCATATATGTTTGTCCCGTTTGAAGATGACAAAATCAACCCATTCATCTCAGAACTTCTGCAAAAAGTCACAGCCAATGAGTTTGATGCTGCAGTGGGTGATATTACAATTACTACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAGTCTGGGCTAGTTGTTGTGGCTCCTATTAGAAAGTCAAATTCTAATGCTTGGGCTTTCCTAAGACCATTTACTCCCATGATGTGGCTTGTGACTGGAATGTCTTTCTTTGTTGTGGGTGTTGTTGTGTGGATTTTAGAACGGCGAGTCAACGATGACTTTAGAGGTCCTCCTAGAAGACAGTTTGTGACCATTATATGGTTTAGCTTTTCAACCCTGTTTTTCTCACATAGAGAGAGAACTTTAAGCACTTTAGGTCGCTTAGTGGTAATAATATGGCTATTTGTAGTGCTGATACTAAACTCCAGCTACATAGCAAGTTTGACCTCTATTCTCACGGTGGAACAACTCTCTTCACCTGTGAAAGGAATTGAAAGCTTAGTGACAAGCAAAGAGCTCATTGGCTATCCGAGAGGTTCATTTGCAGAGAATTACCTCACTGAGGAACTCAACATAATGAAATCCAGGCTTGTTCCTTTGGATTCTCCATCTGAATATGAGAAAGCCTTGAAGGATGGGCCTGCCAATGGTGGTGTGGCTGCTATAATTGATGAACGTGCTTACATGGAGCTCTTTCTTGCAACTAGATGTGAATTTGGAATCGTTGGTCAAGAGTTCACCAAAATGGGCTGGGGTTTTGCATTTCCAAGAGACTCTCCATTGGCAATAGATATGTCAACAGCAATATTGAAACTTTCAGAGAATGGTGATCTTCAAAGAATTCATGACAAATGGCTTTCAAGAAGTGCGTGCAGTTCAGAAGGCTCAAAGCAAGGCATAGACAGATTAGAGCTCAAGAGCTTCTGGGGTCTCTTCCTTATCTGTGGCATTGCCTGTTTCATAGCCCTCCTTTGTTATGTCATTCGCATGGTCTACCGCTTCAGCCGCCACTCTGGTGACAACCTCGCCGGCTCATCCCACTCGGCTCGAATCCGATCATTCATTTCCTTTGTCAATGAAAGGGAAGATGAAGCAAAGAATTGTGCCAAGCCAAAGAGAAGCAAAAAGGTCGCGAATGAAGATAGGTCAATCATGGATGCCTCCAATATTGATAGTAGTGTTCATTATGAAAATAATTCTTCTCAGTGTTAA 2775 0.4108 MQRIWLLVLVIFYCGIHSNGLNGVPARPDSVNIGAILSFNSTIGKVAKVAIDAAKDDINSNSSLLNGTKLNISFQDTKFSTGFLGIIDSLLLMENNTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFVRTSQSDRFQMAAVADIVDYYQWKDVIAIYIDDDHGRNGIVSLEDELAEKSCKISYKAPLTPNNINREEINSALVKVIIRESRVIVLHIYPSFGLDVLKVAKSLGMLGSGYVWLATDWLSTVLDTDPSRSSSYMNDLQGVITLRMYTPDSGMKKNFTSRWSNLTKEKALDQSPFMWNTYGLYAYDTVWVLAYALDSFFNSGGTLSFTNDSSLNKLVGDRLGLNSVGVFANGSLLMEDIMKVNRSGLTGQIMFSSDGECMNPAYEIINVIGTGVRRIGFWSNSSGLHTGQEAPSHSSSSKGLYGVIWPGQTTATPRGWVFANNGRRLRIGVPLRISYREFVSRIEGSEMVEGYCIDIFKAAVDLLPYPVPYMFVPFEDDKINPFISELLQKVTANEFDAAVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWLVTGMSFFVVGVVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFSHRERTLSTLGRLVVIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKELIGYPRGSFAENYLTEELNIMKSRLVPLDSPSEYEKALKDGPANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLELKSFWGLFLICGIACFIALLCYVIRMVYRFSRHSGDNLAGSSHSARIRSFISFVNEREDEAKNCAKPKRSKKVANEDRSIMDASNIDSSVHYENNSSQC 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1748 924 MobiDBLite consensus disorder prediction 889 903 - -
Mibi10g1748 924 Gene3D - 770 806 - -
Mibi10g1748 924 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
Mibi10g1748 924 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Mibi10g1748 924 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Mibi10g1748 924 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Mibi10g1748 924 Pfam Bacterial extracellular solute-binding proteins, family 3 487 808 IPR001638 -
Mibi10g1748 924 FunFam Glutamate receptor 704 811 - -
Mibi10g1748 924 FunFam Glutamate receptor 578 708 - -
Mibi10g1748 924 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 885 - -
Mibi10g1748 924 Gene3D - 742 769 - -
Mibi10g1748 924 SUPERFAMILY Periplasmic binding protein-like II 443 809 - -
Mibi10g1748 924 Gene3D - 49 401 - -
Mibi10g1748 924 CDD PBP1_GABAb_receptor_plant 32 426 IPR044440 -
Mibi10g1748 924 Pfam Receptor family ligand binding region 49 411 IPR001828 -
Mibi10g1748 924 MobiDBLite consensus disorder prediction 889 924 - -
Mibi10g1748 924 SMART GluR_14 468 809 IPR001320 GO:0015276|GO:0016020
Mibi10g1748 924 FunFam Glutamate receptor 147 307 - -
Mibi10g1748 924 MobiDBLite consensus disorder prediction 906 924 - -
Mibi10g1748 924 SUPERFAMILY Periplasmic binding protein-like I 26 458 IPR028082 -
Mibi10g1748 924 Gene3D - 462 577 - -
Mibi10g1748 924 PIRSF IGluLR_plant 1 924 IPR017103 -
Mibi10g1748 924 Gene3D - 147 426 - -
Mibi10g1748 924 FunFam Glutamate receptor 462 578 - -
Mibi10g1748 924 CDD GluR_Plant 465 807 - -
Mibi10g1748 924 Gene3D - 578 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1748 Mibi-ChrMibi10 38753997 38759102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1748 5 900 Ion Channels AT3G51480 56.416 0.0 1060