Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1705 ATGCAGAGAATATGGCTTCTTGTGCTTGTGATTTTCTACTGCGGCATTTATTCAAACGGATTAAATGGTGTTCCTGCAAGACCCGATTCCGTAAACATTGGGGCAATTCTAGCATTCAATTCAACCATTGGAAAAGTCGCAAAAGTTGCAATTGATGCAGCAAAGGATGATATAAACTCCAATCCTTCAGTTCTTAATGGAACCCAACTCAATATTTCTTTCCAGGACACCAAATTCTCCACTGGTTTTCTTGGCATCATTGATTCATTATTACTGATGGAGAATAACACAGTGGCCATAATTGGCCCTCAATACTCAGTGATGGCTCATGTGATTTCACACATAGCCAATGAACTACAAGTACCCTTGCTATCATTTGCAGCAACAGACCCTACCCTGACTTCTCTTCAATTCCCATACTTTATTAGAACATCACAGAGTGATCAGTTTCAGATGGCTGCCGTAGCAGATATCGTGGACTACTACCAATGGAGAAATGTCATAGCAATCTACATTGATGATGATCACGGAAGAAATGGGATTGTTTCATTAGAGGATAAGCTAGCTGAGAAACGTTGTAAGATTTCATATAAAGCCCCTCTTAGGCCTAATAACATAAACACAGAAGAAATAAATAGTGCTTTAGTTAAGGTCATTATAAGGGAATCTAGGGTCATAGTCCTCCATATATATCCTAGTTTTGGTTTAGATGTTCTTAAGGTTGCTGAGTCATTAGGCATGTTAGGAAGTGGGTATGTCTGGTTGGCCACTGATTGGCTTTCTACAGTACTAGACACTGATCCATCTAGGTTATCTTCATATATGAATGATCTCCAAGGTGTTATAACCTTGAGAATGTACACACCTGATTCTGGAATGAAAAAGAATTTCACTTCCAGGTGGAGTAGTTTAACAAAGGAGAAATCTCTTGATCAGAGTCCTTTCATGTTGAACACTTATGGGCTTTATGCCTATGACACTGTTTGGGTACTTGCATATGCACTTGATTCATTTTTCAATAGTGGAGGGACTTTATCATTTACAAATGATTCAAGTCTGAACAAACTGATGGGGGATAGATTGGGCCTAAATGCTGTGGGGGTATTTGCTAATGGTAGTTTATTGATGGAAGACATTATGAAGGTGAATAGAACTGGTTTAACAGGTCAAATGATGTTTAGTTCAGATGGTGAGCGTATGAATTCCACTTATGAGATCATTAATGTGATTGGTACTGGGGTTAGGAGGATTGGTTTTTGGTCTAATTCCTCTGGTTTACACACTGGACAAGAAGCACCTGGTCATTCAAGCTCAAGTAAAGGGCTTTATGGTGTGGTATGGCCCGGCCAAACTACTGCAACGCCTCGTGGTTGGGTTTTTGCCAATGATGGGAGGCATCTGAGAATTGGGGTGCCTCTCAGGATTAGTTATCGTGAATTTGTGTCGAGAATTGAAGGATCTGAAACTTTTGAAGGTTATTGTATAGATGTTTTCAAAGCTGCAGTGGACTTGTTGCCTTATCCAGTTCCATACAAGTTTGTCCCGTTTGGAGATGGCAAAACCAACCCATTAAACTCAGATCTTCTGCACAAAATCACAGCCAGTGAGTTTGATGCTGTGGTGGGTGATATTACAATTACCACAAACAGAACAAAGATAGTGGATTTCACTCAACCATATATTGAGTCTGGGCTAGTTGTTGTGGCTCCTATTAGAAAGTCAAATTCTAATGCTTGGGCTTTCCTAAGACCATTTACTCCAATGATGTGGTTTGTGACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTCTGGATTTTAGAACGACGAGTCAATGATGATTTTAGAGGTCCTCCTAGAAGACAGTTTGTGACCATTATATGGTTTAGCTTTTCAACCCTATTTTTTGCACATAGAGAGAGAACTTTGAGCACTTTGGGTCGCTTAGTGGTAATAATATGGCTATTTGTAGTGCTGATACTGAACTCCAGCTACATAGCAAGTTTGACCTCTATTCTCACAGTGGAACAACTCTCTTCACCTGTGAAAGGAATTGAAAGCTTAGTGACAAGCAAAGAACTCATTGGCTATCTGAGAGGTTCATTTGCAGAGAACTACCTCACTGAGGAACTCAACATAATGAAATCCAGGCTTGTTCCCTTGAATTCTCCATCTGAATATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTGGCTGCTATAATTGATGAACGTGCTTACATGGACCTCTTTCTTGCAACTAGATGTGAATTCGGAATCGTTGGACAAGAGTTCACCAAAATGGGCTGGGGTTTTGCATTTCCAAGAGACTCTCCTTTGGCAATAGACATGTCAACAGCAATATTGAAACTATCAGAGAATGGTGATCTTCAGAGAATACATGACAAATGGCTTTTAAGAAGTGCATGCAGTTCAGAAGGCACAAAGCAAGGCATAGACAGATTAGAGCTCAAGAGCTTCTGGGGTCTCTTCCTTCTTTGTGGCATTGCCTGTTTCATAGCCGTCCTTTGTTATGTCATTCGCATGGCCTATCGTTTCAGCCGCCACTCAGGCGACAACCTCGCCGGCTCGTCCCACTCGGCTCGAATCCGATCATTTATTTCCTTTGTCAATGAAAAGGAAGATGAAGCAAAGAATTGTGTCAAGCCAAAGAGAAGCAGAAAGGTAGTACATAAAGATGGGTCAATAATGGATGCCTCTAATATTGACAGTAGTGTTCTTTGTGAAAATGATTCTTCTCAGTGTTAA 2775 0.4072 MQRIWLLVLVIFYCGIYSNGLNGVPARPDSVNIGAILAFNSTIGKVAKVAIDAAKDDINSNPSVLNGTQLNISFQDTKFSTGFLGIIDSLLLMENNTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTLTSLQFPYFIRTSQSDQFQMAAVADIVDYYQWRNVIAIYIDDDHGRNGIVSLEDKLAEKRCKISYKAPLRPNNINTEEINSALVKVIIRESRVIVLHIYPSFGLDVLKVAESLGMLGSGYVWLATDWLSTVLDTDPSRLSSYMNDLQGVITLRMYTPDSGMKKNFTSRWSSLTKEKSLDQSPFMLNTYGLYAYDTVWVLAYALDSFFNSGGTLSFTNDSSLNKLMGDRLGLNAVGVFANGSLLMEDIMKVNRTGLTGQMMFSSDGERMNSTYEIINVIGTGVRRIGFWSNSSGLHTGQEAPGHSSSSKGLYGVVWPGQTTATPRGWVFANDGRHLRIGVPLRISYREFVSRIEGSETFEGYCIDVFKAAVDLLPYPVPYKFVPFGDGKTNPLNSDLLHKITASEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGMSFFVVGAVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFAHRERTLSTLGRLVVIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKELIGYLRGSFAENYLTEELNIMKSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMDLFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLLRSACSSEGTKQGIDRLELKSFWGLFLLCGIACFIAVLCYVIRMAYRFSRHSGDNLAGSSHSARIRSFISFVNEKEDEAKNCVKPKRSRKVVHKDGSIMDASNIDSSVLCENDSSQC 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1705 924 SUPERFAMILY Periplasmic binding protein-like I 26 458 IPR028082 -
Mibi10g1705 924 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Mibi10g1705 924 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Mibi10g1705 924 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 324 336 - -
Mibi10g1705 924 CDD GluR_Plant 467 807 - -
Mibi10g1705 924 FunFam Glutamate receptor 147 303 - -
Mibi10g1705 924 FunFam Glutamate receptor 462 578 - -
Mibi10g1705 924 Pfam Ligand-gated ion channel 808 840 IPR001320 GO:0015276|GO:0016020
Mibi10g1705 924 Pfam Receptor family ligand binding region 49 411 IPR001828 -
Mibi10g1705 924 Pfam Bacterial extracellular solute-binding proteins, family 3 479 807 IPR001638 -
Mibi10g1705 924 Gene3D - 147 426 - -
Mibi10g1705 924 CDD PBP1_GABAb_receptor_plant 32 426 IPR044440 -
Mibi10g1705 924 Gene3D - 578 715 - -
Mibi10g1705 924 Gene3D - 49 401 - -
Mibi10g1705 924 Gene3D - 726 814 - -
Mibi10g1705 924 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 879 - -
Mibi10g1705 924 Gene3D - 462 577 - -
Mibi10g1705 924 SUPERFAMILY Periplasmic binding protein-like II 443 809 - -
Mibi10g1705 924 PIRSF IGluLR_plant 1 922 IPR017103 -
Mibi10g1705 924 SMART GluR_14 468 809 IPR001320 GO:0015276|GO:0016020
Mibi10g1705 924 FunFam Glutamate receptor 578 708 - -
Mibi10g1705 924 FunFam Glutamate receptor 704 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1705 Mibi-ChrMibi10 38291261 38296562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1705 5 904 Ion Channels AT3G51480 56.828 0.0 1062