Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1703 ATGCAGAGAATATGGCTTCTTGTGCTTGTGATTTTCTACTGCGGCATTTATTCAAACGGACTAATTGGTGTTCCTGCAAGACCCGACTCCGTAAACATTGGGGCAATTCTATCATTCAATTCAACCGTTGGAAAAGTCGCAAAAGTTGCAATTGATGCAGCAAAGGATGATATAAACTCTAATCCTTCAGTTCTTAATGGAACCGAGCTCAATATTTCTTTCCAGGATACCAAATTCTCCACTGGTTTTCTCGGTATCATTGATTCCAATGAACTACAAGTACCCTTACTATCATTTGCAGCAACAGATCCTACCCTGACTTCTCTTCAATTCCCATATTTTTTCAGAACATCACAGAGTGATCAGTTTCAGATGGCTGCCGTGGCAGATATCGTGGACTACTACCAATGGAGAGATGTCATAGCTATCTACATTGATGATGATCATGGAAGAAATGGGATAGTTTCATTAGAAGATAAGCTAGCAGAGAAACGTTGTAAGATCTCATATAAAGCCCCTCTTAGGCCTAATAACATAAACAGAGAAGTAAACAGTGCCTTAGTTAAGGTCATTATAAGGGAATCTAGGGTCATAGTCCTCCACATATATCCAAGTTTTGGTCTAGATGTGCTTGAGGTTGCTGAGTCATTAGGCATGTTAGGAAGTGGGTATGTCTGGTTGGCCACTGATTGGCTTTCTACAGTACTAGACACTGATCAATCTAGGTTATCTTCATATATAAATGATCTACAAGGTGTTATAACCTTGAGAATGTACACACCTGATTCTGGAATGAAAAGGAATTTCACTGCCAGGTGGAGTAATTTAACAAAGGAGAAAGCTCTTGATCAGAGTCCTTTCATGTGGAACACTTATGGGCTTTATGCCTATGACACTGTTTGGGTACTTGCATATGCACTTGATTCATTTTTCAATAGTGGAGGGACTTTATCATTTACAAATCATTCAAGTCTGAACAAACTGATGGGGGATAGATTGGGCCTAAATTATGTGGGGGTATTTGCTAATGGTAGTTTATTGATGGAAGACATTATGAAGGTGAACAGAACAGGTTTAACAGGTCAAATGATGTTTAGTTCAGAGGGTGAGCGTATGAATCCTGCTTATGAGATCATTAATGTAATTGGTACTGGGGTTAGAAGGATTGGTTTTTGGTCTACTTCCTCTGGTTTACACACTAGACAAGAAGATTCAAGCTCAAGTAAAGGGCTTTATGGTGTGATATGGCCCGGCCAAACTGCTGCAACACCTCGTGGTTGGGTTTTTTCCAATGATGGGAGGTATCTAAGAATTGGGGTGCCTCTCAAAATTGGTTACCGTGAGTTCGTGTCAAGAATCGAAGGATCCGAAACATTTGGAGGTTATTGTATAGATGTTTTCAAAGCTGCAGTGGACTTGTTGCCTTATCCAGTTCCATACAAGTTTGTCCCATTTGGAGATGGAGAGAGAACTATGAGCACTTTGGGTCGCTTAGTGGTGATAATATGGCTATTTGTAGTGCTGATACTGAACTCCAGCTACATAGCAAGTTTGACCTCTATTCTCACTGTGGAACAACTCTCTTCACCTGTGAAAGGAATTGAAAGCTTAGTGACAAGCAAAGAACGCATTGGCTATCCGAGAGGTTCATTTACAGAGAACTACCTCACTGAGGAACTACTCAACATAATGAAATCCAGGCTTGTTCCCTTGAATTATCCATCTGATTATGAGAAAGCCTTGAATGATGGACCTGCCAATGGTGGTGTTGCTGCTATAATTGATGAACGTGCTTACATAGAGCTCTTTCTTGCAACTAGATGTGAATTTGGAATCATTGGTCAAGAAGACTCTCCTTTGGCAATAGACATGTCAACAGCAATATTGAAACTATCAGAGAATGGTGATCTTCAGAGAATTCATAACAAATGGCTTTCAAGAAGTGCATGCAGTTCAGAAGGCACAAAGCAAGGCATAGACAGATTAGAACTCAAGAGCTTCTGGGGTCTCTTCCTTCTCTGTGGCATTGCTTGTTTCATAGCCCTCCTTTGTTATGTCATTCGCATGGCCTATCGTTTCAGCCGCCACTTTGGCGACAACCTCGCCGACTCGTCCCACTCGGCTCGAATCCGATCATTCATATCCTTTGTCAATAAAAAGGAAGACGAAGCAAAGAATTGTGCCCAGCCAAAGAGAAGCAGAAAGGTAGTGCATGAAGATGGGTCAATAATGGATCCCTCCAATATTGACAGTAGTGTTCATCATGAAAATGATTCTTCACAGTGTTAA 2289 0.4093 MQRIWLLVLVIFYCGIYSNGLIGVPARPDSVNIGAILSFNSTVGKVAKVAIDAAKDDINSNPSVLNGTELNISFQDTKFSTGFLGIIDSNELQVPLLSFAATDPTLTSLQFPYFFRTSQSDQFQMAAVADIVDYYQWRDVIAIYIDDDHGRNGIVSLEDKLAEKRCKISYKAPLRPNNINREVNSALVKVIIRESRVIVLHIYPSFGLDVLEVAESLGMLGSGYVWLATDWLSTVLDTDQSRLSSYINDLQGVITLRMYTPDSGMKRNFTARWSNLTKEKALDQSPFMWNTYGLYAYDTVWVLAYALDSFFNSGGTLSFTNHSSLNKLMGDRLGLNYVGVFANGSLLMEDIMKVNRTGLTGQMMFSSEGERMNPAYEIINVIGTGVRRIGFWSTSSGLHTRQEDSSSSKGLYGVIWPGQTAATPRGWVFSNDGRYLRIGVPLKIGYREFVSRIEGSETFGGYCIDVFKAAVDLLPYPVPYKFVPFGDGERTMSTLGRLVVIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKERIGYPRGSFTENYLTEELLNIMKSRLVPLNYPSDYEKALNDGPANGGVAAIIDERAYIELFLATRCEFGIIGQEDSPLAIDMSTAILKLSENGDLQRIHNKWLSRSACSSEGTKQGIDRLELKSFWGLFLLCGIACFIALLCYVIRMAYRFSRHFGDNLADSSHSARIRSFISFVNKKEDEAKNCAQPKRSRKVVHEDGSIMDPSNIDSSVHHENDSSQC 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1703 762 Gene3D - 89 373 - -
Mibi10g1703 762 SUPERFAMILY Periplasmic binding protein-like II 412 647 - -
Mibi10g1703 762 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 487 - -
Mibi10g1703 762 FunFam Glutamate receptor 615 644 - -
Mibi10g1703 762 MobiDBLite consensus disorder prediction 745 762 - -
Mibi10g1703 762 MobiDBLite consensus disorder prediction 727 762 - -
Mibi10g1703 762 FunFam Glutamate receptor 120 278 - -
Mibi10g1703 762 Pfam Receptor family ligand binding region 89 383 IPR001828 -
Mibi10g1703 762 Gene3D - 120 398 - -
Mibi10g1703 762 MobiDBLite consensus disorder prediction 727 741 - -
Mibi10g1703 762 Gene3D - 26 88 - -
Mibi10g1703 762 Pfam Ligand-gated ion channel 482 678 IPR001320 GO:0015276|GO:0016020
Mibi10g1703 762 PIRSF IGluLR_plant 86 493 IPR017103 -
Mibi10g1703 762 PIRSF IGluLR_plant 1 89 IPR017103 -
Mibi10g1703 762 PIRSF IGluLR_plant 487 761 IPR017103 -
Mibi10g1703 762 Gene3D - 476 551 - -
Mibi10g1703 762 SUPERFAMILY Periplasmic binding protein-like I 26 427 IPR028082 -
Mibi10g1703 762 Gene3D - 592 652 - -
Mibi10g1703 762 SMART GluR_14 437 647 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1703 Mibi-ChrMibi10 38265549 38270865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1703 485 742 Ion Channels AT3G51480 57.455 8.36e-93 308