Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1702 ATGCAGAGAATATGGCTTCTTGTGCTTGTGATGATTTTCTACTGTGGCATTTATTCAAACGGATTAAATGGTGTTCCGGCAAGACCCAATTCCGTAAACATTGGGGCGATTCTATCATTCAATTCAACCATTGGAAAAGTCACAAAACTTGCAATTGATGCAGCAAAGGATGATATAAACTCCAATCATTCACTTCTTAATGGGACCAAACTCAATATTTCTTTCCAGGACACCAAATTCTCCACTGGTTTTCTCGGCATCATTGATTCATTACTACTGATGGAGAACAACACAGTGGCCATAATTGGCCCTCAATACTCAGTGATGGCTCATGTGATTTCACACATAGCTAATGAACTACAAGTACCCTTGCTATCATTTTCAGCAACAGATCCTACCCTGACTTCTCTTCAATTCCCATATTTTTTCAGAACATCACAGAGTGATCAGTTTCAGATGGCTGCCGTGGCAGATATTGTGGACTACTACCAATGGAGAGATGTCATAGCAATCTACATTGATGATGATCATGGAAGAAATGGGATTGTTTCATTAGAGGATAAGCTAGCTGAGAAACGTTGTAAGATCTCATATAAAGCCCCTCTTAGCCCTAATAACATAAACAGAGAAGAAATAAACAGTGCCTTAGTTAAGGTCATTATAAGGGAATCTAGGGTCATAGTCCTCCATATATATCCCAGTTTTGGTTTAGATGTGCTTAAGGTTGCTGAGTCATTAGGCATGTTAGGAAGTGGGTATGTCTGGTTGGCCACTGATTGGCTTTCTACAGTACTAGACACTGATCCATCTAGGTCATCTTCATATATGAATGATCTACAAGGTGTTATAACCTTGAGAATGTACACACCTGATTCTGGAATGAAAAAGAATTTCACTTCCAGGTGGAGTAATTTAACAAAGGAGAAAGCTCTTGATCAGAGTCCTTTCATGTGGAACACTTATGGGCTTTATGCCTATGACACTGTTTGGGTACTTGCATATGCGCTTGATTCATTTTTCAATAATGGAGGGACTTTATCATTTACAAATGATTCAAGTCTGAACAAACTGATGGGGGATAGATTGGGCCTAAATTCTGTGGGGGTATTTGCTAATGGTAATTTATTGATGGAAGACATTATGAAGGTGAACAGAACTGGCTTAACAGGTCAAATGATGTTTAGTTCAGATGGTGAGCGTATGAATCCTGCTTATGAGATCATTAATGTGATTGGTACTGGGGTTAGGAGGATTGGCTTTTGGTCTAATTCCTCTGGTTTACACACTGGACAAGAAGTAGCTGGTCATTCAAGCTCAAGTAAAGGGCTTTATGGTGTGATATGGCCCGGCCAAACTACTGCAACGCCTCGGGGTTGGGTTTTTGCCAACGATGGGAGACATTTGAGAATTGGGGTGCCTATCAGGATTAGTTACCGTGAATTCGTGTCAGGAATTGAAGGATCTGAAAATTTTGGAGGTTATTGTATAGATGTTTTCAAAGCTGCAGTGGACTTGTTGCCTTATCCAATTCCATACAAGTTTGTCCCATTTGGAGATGGTAAAACCAACCCGTTAAACTCAGAACTTCTGCACAAAATCACTGCCAGTGAGTTTGATGCTGTGGTGGGTGATATTACTATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAGTCTGGGCTAGTTGTTGTGGCTCCTATTAGAAAGTCAAACTCTAATGCTTGGGCTTTCTTAAGACCATTTACTCCAATGATGTGGTTTGTGACTGGAATATCTTTCTTTGTTGTGGGAGCAGTTGTCTGGATTTTAGAACGGCGAGTCAATGATGATTTTAGGGGTCCTCCTAGAAGACAGTTTGTGACCATTATATGGTTTAGCTTTTCAACTCTGTTTTTTGCCCATAGAGAGAGAACTCTGAGCACTTTGGGTCGTTTAGTGGTGATTATATGGCTATTTGTAGTGCTGATACTGAACTCCAGCTACATTGCAAGCCTGACCTCCATTCTCACAGTGGAACAACTCTCTTCACCTGTGAAAGGAATTGAAAGCTTAGTGACAAGCAAAGAACGCATTGGCTATCTGAGAGGTTCATTTGCAGAGAACTACCTCACTGAGGAACTCAACATCATGAAATCCAGGCTTATTCCCTTTAATTCTCTATCTGAATATGAGAAAGCCTTGAAGGACGGACCTGCCAATGGTGGTGTTGCTGCTATAATTGATGAACGTGCTTACATGGACGTCTTTCTTGCAACTAGATGTGAATTTGGAATCGTTGGACAAGAGTTCACCAAAATGGGCTGGGGTTTTGCATTTCCAAGAGACTCTCCTTTGGCAATAGACATGTCAACAGCAATATTAAAACTATCAGAGAATGGTGATCTTCAGAGAATTCATGACAAATGGCTTTCAAGAAGTGCGTGCAGTTCAGAAGGCTCAAAGCAAGGCATAGACAGATTAGAACTCAAGAGTTTCTGGGGTCTCTTCCTTCTCTGTGGCATTGCCTGTTTCTTAGCCCTCCTTTGTTATGTCATTCGCATGGCCTACCGTTTCAACCGCCACTCTGATGACAACCTCTCCGCCTCGTCCCACTCGGCTCGAATCCGATCATTTATTTCCTTTGTCAATGAAAAGGAAGATGAAGCAAAGAATTGTGCCAAGCCAAAGAGAAGCAGAAAGGTAGTGCATGAAGATGGGTCAATAATGGATGCCTCCAATATGGACAGTAGTGTTCATTATGAAAATGATTCTTCTCAGTGTTAA 2778 0.4096 MQRIWLLVLVMIFYCGIYSNGLNGVPARPNSVNIGAILSFNSTIGKVTKLAIDAAKDDINSNHSLLNGTKLNISFQDTKFSTGFLGIIDSLLLMENNTVAIIGPQYSVMAHVISHIANELQVPLLSFSATDPTLTSLQFPYFFRTSQSDQFQMAAVADIVDYYQWRDVIAIYIDDDHGRNGIVSLEDKLAEKRCKISYKAPLSPNNINREEINSALVKVIIRESRVIVLHIYPSFGLDVLKVAESLGMLGSGYVWLATDWLSTVLDTDPSRSSSYMNDLQGVITLRMYTPDSGMKKNFTSRWSNLTKEKALDQSPFMWNTYGLYAYDTVWVLAYALDSFFNNGGTLSFTNDSSLNKLMGDRLGLNSVGVFANGNLLMEDIMKVNRTGLTGQMMFSSDGERMNPAYEIINVIGTGVRRIGFWSNSSGLHTGQEVAGHSSSSKGLYGVIWPGQTTATPRGWVFANDGRHLRIGVPIRISYREFVSGIEGSENFGGYCIDVFKAAVDLLPYPIPYKFVPFGDGKTNPLNSELLHKITASEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSNSNAWAFLRPFTPMMWFVTGISFFVVGAVVWILERRVNDDFRGPPRRQFVTIIWFSFSTLFFAHRERTLSTLGRLVVIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLVTSKERIGYLRGSFAENYLTEELNIMKSRLIPFNSLSEYEKALKDGPANGGVAAIIDERAYMDVFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLELKSFWGLFLLCGIACFLALLCYVIRMAYRFNRHSDDNLSASSHSARIRSFISFVNEKEDEAKNCAKPKRSRKVVHEDGSIMDASNMDSSVHYENDSSQC 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1702 925 PIRSF IGluLR_plant 1 924 IPR017103 -
Mibi10g1702 925 Gene3D - 726 815 - -
Mibi10g1702 925 Pfam Ligand-gated ion channel 810 841 IPR001320 GO:0015276|GO:0016020
Mibi10g1702 925 Gene3D - 148 427 - -
Mibi10g1702 925 Gene3D - 50 402 - -
Mibi10g1702 925 SUPERFAMILY Periplasmic binding protein-like I 27 459 IPR028082 -
Mibi10g1702 925 Pfam Receptor family ligand binding region 49 412 IPR001828 -
Mibi10g1702 925 SUPERFAMILY Periplasmic binding protein-like II 444 810 - -
Mibi10g1702 925 CDD PBP1_GABAb_receptor_plant 33 427 IPR044440 -
Mibi10g1702 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 872 - -
Mibi10g1702 925 CDD GluR_Plant 468 808 - -
Mibi10g1702 925 Gene3D - 463 578 - -
Mibi10g1702 925 FunFam Glutamate receptor 705 812 - -
Mibi10g1702 925 Gene3D - 579 713 - -
Mibi10g1702 925 Pfam Bacterial extracellular solute-binding proteins, family 3 488 809 IPR001638 -
Mibi10g1702 925 FunFam Glutamate receptor 148 308 - -
Mibi10g1702 925 FunFam Glutamate receptor 463 579 - -
Mibi10g1702 925 FunFam Glutamate receptor 579 709 - -
Mibi10g1702 925 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1702 Mibi-ChrMibi10 38251493 38256529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1702 5 905 Ion Channels AT3G51480 56.326 0.0 1055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2158 12 38070435 38073659 Mibi10g1702 10 38251493 38256529 CCT
Mibi10g1702 10 38251493 38256529 Mibi10g1702 10 38251493 38256529 ECH
Mibi10g1702 10 38251493 38256529 Mibi12g2158 12 38070435 38073659 ECH