Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi10g1698 | ATGCCTACCAGTTTGTCCAGAAATTTGACAGATGTTATATCTTTTACGGGAAGAATTGGTCGCCCCATCATCGGAGTTCATGCCCTCAAACCCACTTTCAGGCCACCCTCCTTTATGACCACTCTATCTGATCATCACTCCAAGAAGCACCTTTTTCACACATCTTCATTCCAGACAAGGACAAACAATGGAAGAGGACAAGGGAGCTCCACTGAAGTAAAGAAAAAAAGAACAGACCATGACCCCTCATCACAACCAATCTTGAAGAAACAAAAGCAAGACACTACATCTACCCCTTCTTCTACAAAGGTGCAAGCACCAAAAGTCAAGCTAGGCGACAGGATTACAACTCTTCAGCAAATTGTGTCGCCATTTGGAAAGACAGACACCGCATCCGTGCTTTTTGAAGCGATTGGGTATATAAAATTCTTACAAGAACAAGTGCAGCTTCTGAGCAACTCTTACATGAAGACTAACTCTCACAGGGAAACCACATGGGGAAGCATGGAGAGAAAAGATGAGAAGGGAGACTTAAAGAGCAAAGGGCTTTGTTTGGTTCCAATTTCATGGGCTCCTCAGGCTTATAGAGATAACACTGCCCCTGATTACTGGACTCCTGCTTATCGAGGTTGCTTGTTTAGGTAG | 645 | 0.4403 | MPTSLSRNLTDVISFTGRIGRPIIGVHALKPTFRPPSFMTTLSDHHSKKHLFHTSSFQTRTNNGRGQGSSTEVKKKRTDHDPSSQPILKKQKQDTTSTPSSTKVQAPKVKLGDRITTLQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNSYMKTNSHRETTWGSMERKDEKGDLKSKGLCLVPISWAPQAYRDNTAPDYWTPAYRGCLFR | 214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi10g1698 | 214 | MobiDBLite | consensus disorder prediction | 54 | 69 | - | - | |
| Mibi10g1698 | 214 | MobiDBLite | consensus disorder prediction | 53 | 107 | - | - | |
| Mibi10g1698 | 214 | CDD | bHLH_AtbHLH_like | 110 | 152 | IPR045239 | - | |
| Mibi10g1698 | 214 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 50 | 192 | - | - | |
| Mibi10g1698 | 214 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 95 | 144 | IPR011598 | GO:0046983 | |
| Mibi10g1698 | 214 | Gene3D | - | 107 | 166 | IPR036638 | GO:0046983 | |
| Mibi10g1698 | 214 | MobiDBLite | consensus disorder prediction | 88 | 105 | - | - | |
| Mibi10g1698 | 214 | MobiDBLite | consensus disorder prediction | 70 | 87 | - | - | |
| Mibi10g1698 | 214 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 110 | 161 | IPR036638 | GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi10g1698 | Mibi-ChrMibi10 | 38173875 | 38175727 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi10g1698 | 69 | 212 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G20640 | 46.939 | 1.77e-32 | 119 |