Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1697 ATGGTAGCTGGCGCCCAGCAGCAGCAACAACCTCAACCTCAATCTCAGCAAGCTGCTACTACCTCTGCGCAAGATGAGGCCTTAAAGAGGAACACCGATTGTGTCTACTTTCTTGCTTCCCCCTTGACATGCAAAAAGGGAAGTGAATGTGAGTATCGCCATAGTGAGTATGCTCGGGTCAATCCCCGAGATTGTTGGTATTGGTTGAATGGCAATTGCTTGAATCCCAAATGTTCCTTCCGTCACCCGCCTCTTGATAGCTTCTTATCATCGCCACAGGCAGCCACTGCTGGTGGCTCTTCTGCACCCCCATCACAGGCTGCACCAACTCCTGCACCACACGCACCTTATAATTCTACAAAGCAAGCTGTCCCTTGCATTTTCTTCCAGAAAGGGCTTTGCTTAAAAGGTGATCGGTGTGCTTTTTCGCATGGACCAAATCCTAACACCAGTAATAAAGTTCCCCAGGTTCAGGCGACTAACCAGGTTACTGAGCCTCCAAGTTTTAAGAAGGTTTTTAGTGGCCCAGAAAAGTCAACACAAGAAAGGAAAATTTCCCAAGCAAACGTGGTGAAGCCAGCTGCACGAGCTGAAGCTAAGCCTGCCCAAAATGTTGAAACTGCTTCGCATAGAAATGTTGTTGCTGTAGAGAGGCATGCACCACCACCAATGGGATTTGATAATGAGGCGTCTAGATTCAAGGTAGTAAATCCTCCACCGGTCACCAATGGAGCCACTGTTGCCAGGCCAAACCATGCTTATCAATCTCATGTATCAGATGATCATAGTTTCCACAACGGCAAGGAAAGTGATGAATTCTTGAGAGAATCCTCACCTGGCTTTGATGTACTTGTTGCTGATGAACTGAGGAATGCAGATTACTATGACGAAGAGGACCAATTTGGAAAAGCAAGAGGTCAAGATGGAATGAACTTGGACTCTGTGAATCAATATGATTTAGGGCATTCGGTAGATTATAAATCTGTAGCTGATATTGACCAAGAAAGATATTGTGGGCCACAAGGTTATGACACGTATGATCAAATGCAGGAGACATATGAATGGGATCAGCGCAGGAATTCATCCGAAAGAATGTTCCGGCCAACAGCCCATTTAGAAAGGATGACTCATCGCAGATCTGGCAGTCCTGAAAATGTTGGGGTTTCAGACCTTCGACATCGTTTATCTAAGCGTAGGAGGGTCAATGGTTTGAAGTCTGTTGTGAGTCATGATTATGCGCGTCAGAGTCGTCAGAGCCATGATGATGAGCAAATTCGTCGATTTTCTTCTCAGAAGGATGCTCACCAGTTACCTCCGAATGAAAGTGCTATCAGTAATCGCTTCCGAGGCAGGATTAAGCTTCCAGCAAATGGTGGTGAATACGTGGAGAGGGAATCGGACAGGGGAAGAAATAGAAGTGCATTGTCACCTGGAACTATGCAGGCTCCTCACCCAGGTAGGCTCCGTGATAGATTGAGAGGAAGGGTGCAAGAAGATATTGAGAGGAAAAACTTGAGGGATCGGCCTGCAAGGAGAGAAATGAATGGGGACCAAAATGCTGATTTTGATGGACCAAAGAGTCTTGCTGAACTGCGAAATGGAATCAGTAGTAGGATTAAGGAGCATCAATTTCTTGGGAAGAGGAAAAGTTTTAAGGAACAACAACAATCTGAAGATGATTTTATGTTTGAAGGTCCGAAACCTCTCTGTGAGATTTTGAAGGAGAAGAGAGAACGTGGAGTTGATGCAGCATCCAAGAGTGGCAAATTGTCTGAGAATAAGGGAGACAGTAAAGACAGAGAAGTTATTAATGGCTCGGAGCACACCTCTGTCACAGATGCACAAAATGGCACTTTGCCTGCAAATAAGGAAGATTTCAAGAACCAGGAAACCGAGAACACATATGAAGAAGGAATGATGGACAACGAGACAGTTGAAGAGCAGGAGTATGAAGGTGATGATCAGAAGGATGGTGATTATTACTATGAGCAAGTTGACGAGGGAGACTACAATTATGAAGAAGGTGAAAATCCAGAGCAGGAAGAATACATAGATGATGAGGATGGGGAGGATGGGGAAGACTTTGCTAAGAAGATTGGTGTGATGCTCACATGA 2115 0.452 MVAGAQQQQQPQPQSQQAATTSAQDEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWYWLNGNCLNPKCSFRHPPLDSFLSSPQAATAGGSSAPPSQAAPTPAPHAPYNSTKQAVPCIFFQKGLCLKGDRCAFSHGPNPNTSNKVPQVQATNQVTEPPSFKKVFSGPEKSTQERKISQANVVKPAARAEAKPAQNVETASHRNVVAVERHAPPPMGFDNEASRFKVVNPPPVTNGATVARPNHAYQSHVSDDHSFHNGKESDEFLRESSPGFDVLVADELRNADYYDEEDQFGKARGQDGMNLDSVNQYDLGHSVDYKSVADIDQERYCGPQGYDTYDQMQETYEWDQRRNSSERMFRPTAHLERMTHRRSGSPENVGVSDLRHRLSKRRRVNGLKSVVSHDYARQSRQSHDDEQIRRFSSQKDAHQLPPNESAISNRFRGRIKLPANGGEYVERESDRGRNRSALSPGTMQAPHPGRLRDRLRGRVQEDIERKNLRDRPARREMNGDQNADFDGPKSLAELRNGISSRIKEHQFLGKRKSFKEQQQSEDDFMFEGPKPLCEILKEKRERGVDAASKSGKLSENKGDSKDREVINGSEHTSVTDAQNGTLPANKEDFKNQETENTYEEGMMDNETVEEQEYEGDDQKDGDYYYEQVDEGDYNYEEGENPEQEEYIDDEDGEDGEDFAKKIGVMLT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1697 704 MobiDBLite consensus disorder prediction 575 606 - -
Mibi10g1697 704 FunFam Zinc finger CCCH domain-containing protein 17 22 85 - -
Mibi10g1697 704 ProSiteProfiles Zinc finger C3H1-type profile. 28 57 IPR000571 GO:0046872
Mibi10g1697 704 MobiDBLite consensus disorder prediction 91 116 - -
Mibi10g1697 704 Gene3D - 116 187 - -
Mibi10g1697 704 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 124 146 IPR000571 GO:0046872
Mibi10g1697 704 Gene3D - 17 86 - -
Mibi10g1697 704 MobiDBLite consensus disorder prediction 375 492 - -
Mibi10g1697 704 Pfam Zinc-finger containing family 29 85 IPR041686 -
Mibi10g1697 704 ProSiteProfiles Zinc finger C3H1-type profile. 120 147 IPR000571 GO:0046872
Mibi10g1697 704 MobiDBLite consensus disorder prediction 607 624 - -
Mibi10g1697 704 MobiDBLite consensus disorder prediction 664 692 - -
Mibi10g1697 704 SUPERFAMILY CCCH zinc finger 121 145 IPR036855 GO:0046872
Mibi10g1697 704 MobiDBLite consensus disorder prediction 414 430 - -
Mibi10g1697 704 MobiDBLite consensus disorder prediction 575 693 - -
Mibi10g1697 704 MobiDBLite consensus disorder prediction 506 528 - -
Mibi10g1697 704 MobiDBLite consensus disorder prediction 636 654 - -
Mibi10g1697 704 MobiDBLite consensus disorder prediction 1 24 - -
Mibi10g1697 704 SMART c3hfinal6 61 84 IPR000571 GO:0046872
Mibi10g1697 704 SMART c3hfinal6 120 146 IPR000571 GO:0046872
Mibi10g1697 704 SMART c3hfinal6 29 56 IPR000571 GO:0046872
Mibi10g1697 704 MobiDBLite consensus disorder prediction 91 105 - -
Mibi10g1697 704 ProSiteProfiles Zinc finger C3H1-type profile. 59 85 IPR000571 GO:0046872
Mibi10g1697 704 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 25 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1697 Mibi-ChrMibi10 38162826 38166502 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi10g1697 zf-CCCH_3 1.6e-11 CL0537