Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1688 ATGGCATTGACTGCACCAAACCCCCTCTTGAGGGTGGAGGAGATACAAGGGAGAGGAAGGGGAATAATTGCATCTCAATCTCTTAAAGCTGGCCAAGTTGTTCTGAGAGATTCTCCTATCCTTCTGTATTCTGCTTTGCCTTTGACCCCACAGTCATCATCCACCTCCTCTTCTCCAGGCTTCTGTGACCACTGTTTCAGAATCCTACCAGGGCCATCTTCAATTTCATGCCCTTCTTGTTGCCACCATCAATTTTGTAGTCCGAAATGTCTATCGATTGCTCAAAAGACATCCCACACTTCTTGGGTATGTCAATCACTATCTCATCTCCGAGCCAATTCTGTACTGCTTGAACAGCCCATTGAGTGTCAAATCCAAGTGCATTTTCTCATTGCTGCCTACAATCTCGCCAATGTCTCTCCATCAAACTTCCAAACTTTGCTTGCTCTTCAAGGTTCTCCTGATGATAGCACAATTGCTGCAGCTCAGTTCCTGCACTCCCTTATTACGCCCCTCTCTCCATGTCCCCCAACTAGTCATCAGAATGGATTTTCCTTGGAGCTCACTGCTGCCCTGTTGGCCAAAGATAAGCTCAATGCATTTGGCTTGATGCAACCCTTCTCTGAAGATAATGACCAGAGATCTGTGAGAGCTTATGGAATATACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCTAATGCCTGCAGATTTGATTATGTGGATGCTGACGTGACAGATGACAACCATAATAATACTGACTTTATCATTAGGATGATTCATGATGTTCCTGAAGGTAGGGAGGTCTGTTTGAGCTATTTCCCTGTGAATGAGAATTATTCTAGTAGGCAGAAAAGACTGGCAGAAGACTATGGCTTTACCTGTAAGTGTGATCGCTGTAATGTTGAAACTAATTGGTCGGATAACGACAGTGTTGAGGGTGATGATGCAGAGGATATTGACGAGGCAATGGATGAGGATGAATGCGAAAACATGGCAGCTTCTGACACTGAAAGTAATCCGCAAGGAGATAACAGTGATTTTCCTCATGCATATTTCTTCTTGAAATTCATGTGTGATAGAAAGAATTGCTGGGGTACTTTAGCTCCTTTACCCCCACAGGGCAATAATCCATCCAATGTTATGGAATGTAATGTCTGCGGCAATTTGAAGAGCGACGATGTTGTTAATGGTGATGGGGGACAAGATGGAGTTTCCATGGAGGACTGA 1233 0.442 MALTAPNPLLRVEEIQGRGRGIIASQSLKAGQVVLRDSPILLYSALPLTPQSSSTSSSPGFCDHCFRILPGPSSISCPSCCHHQFCSPKCLSIAQKTSHTSWVCQSLSHLRANSVLLEQPIECQIQVHFLIAAYNLANVSPSNFQTLLALQGSPDDSTIAAAQFLHSLITPLSPCPPTSHQNGFSLELTAALLAKDKLNAFGLMQPFSEDNDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDADVTDDNHNNTDFIIRMIHDVPEGREVCLSYFPVNENYSSRQKRLAEDYGFTCKCDRCNVETNWSDNDSVEGDDAEDIDEAMDEDECENMAASDTESNPQGDNSDFPHAYFFLKFMCDRKNCWGTLAPLPPQGNNPSNVMECNVCGNLKSDDVVNGDGGQDGVSMED 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1688 410 ProSiteProfiles SET domain profile. 8 275 IPR001214 GO:0005515
Mibi10g1688 410 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 399 IPR044238 -
Mibi10g1688 410 SUPERFAMILY SET domain 7 297 IPR046341 -
Mibi10g1688 410 Gene3D - 118 200 - -
Mibi10g1688 410 Gene3D - 61 113 - -
Mibi10g1688 410 Gene3D SET domain 21 301 IPR046341 -
Mibi10g1688 410 CDD SET_SMYD 198 301 - -
Mibi10g1688 410 SMART set_7 8 281 IPR001214 GO:0005515
Mibi10g1688 410 Pfam SET domain 19 274 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1688 Mibi-ChrMibi10 38066153 38067385 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi10g1688 SET 5.3e-11 No_clan