Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1685 ATGGCGAGATTATCAGTGCCTATTGTTTCAACCATGTTCCTCCTCATGCTCCTTTTGATGGCCACTGAGATGGGTCCAATGGTGGCGGAAGGAAGGACGTGCGAGTCACAGAGCCAGCGCTTCAAGGGAGCATGCGTCAGCAAATCCAACTGCGCCTCCGTTTGCCAGACTGAGGGCTTCCCTGGCGGTCACTGCCGTGGCCTTAACCGCCGTTGCTACTGCGCCAAACCTTGTTAG 237 0.5612 MARLSVPIVSTMFLLMLLLMATEMGPMVAEGRTCESQSQRFKGACVSKSNCASVCQTEGFPGGHCRGLNRRCYCAKPC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1685 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Mibi10g1685 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Mibi10g1685 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Mibi10g1685 78 Gene3D - 32 78 IPR036574 -
Mibi10g1685 78 PANTHER DEFENSIN-LIKE PROTEIN 1 10 75 - -
Mibi10g1685 78 CDD Knot1 43 74 IPR003614 GO:0006952
Mibi10g1685 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Mibi10g1685 78 SMART gth_4 33 78 IPR003614 GO:0006952
Mibi10g1685 78 Pfam Gamma-thionin family 32 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1685 Mibi-ChrMibi10 38045058 38045422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1685 3 78 Plant Defensins Gene Families AT2G02100 55.263 3.94e-30 99.8