Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1684 ATGGCCAAGTCTGTGCCTGTAGTTTCCACCATATTCGTCCTCCTCCTCCTTTTGGTGGCCACTGAGATGGGACCCATGGTGGCTGAAGCTAGGACATGCGAGTCACAGAGCCACAAATTCAGGGGAACATGTCTCAGCAAATCTAACTGCGCCAACGTCTGCCGTACAGAGGGCTTCCCTGGCGGCCACTGCCGTGGATTCCGCCGCCGTTGCTTCTGCACCCGCCCTTGTTGA 234 0.5726 MAKSVPVVSTIFVLLLLLVATEMGPMVAEARTCESQSHKFRGTCLSKSNCANVCRTEGFPGGHCRGFRRRCFCTRPC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1684 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Mibi10g1684 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Mibi10g1684 77 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Mibi10g1684 77 ProSiteProfiles Invertebrate defensins family profile. 41 75 IPR001542 GO:0006952
Mibi10g1684 77 SMART gth_4 32 77 IPR003614 GO:0006952
Mibi10g1684 77 CDD Knot1 42 74 IPR003614 GO:0006952
Mibi10g1684 77 Pfam Gamma-thionin family 31 77 - -
Mibi10g1684 77 Gene3D - 31 77 IPR036574 -
Mibi10g1684 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Mibi10g1684 77 FunFam Defensin-like protein CAL1 31 77 - -
Mibi10g1684 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1684 Mibi-ChrMibi10 38040296 38040688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1684 1 77 Plant Defensins Gene Families AT2G02100 63.636 1.09e-34 111