Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1674 ATGACTCGTACTCTCAAATCCACCGCCAATTCCACCTCCGTCGCCGCCGCCGCCGCCATCACCGCCGCAGCTCCGCCACCAGAAGCCGTGGCCTTAGAATCAGACTTCGTCGTCATCCTCGCGTCACTCCTCTGTGCCCTAATTTGCACCGTCGCGTTAATCGCCGTATGTCGCTGTACCTGGTTCCGTCGCGGCGGATCTGGATCCAACGGTGGATTTCCAGGTCAGTCCTTAGCGAATAAAGGCCTCAAGAAGAAGGTTCTTCAATCCATGCCTAAATTCGCTTACATTGATGGAAGGAATTCTGAGAAGTGGTTGGCTACATCTGAGTGTGCGATTTGCTTGGCTGAATTCGCTGGAGAAGACGAGATCCGTGTTCTTCCTCAGTGTGGCCATGGATTTCATGTGGCTTGTATAGATACTTGGCTTGGATCTCACTCTTCTTGTCCTTCTTGTCGTCAGATTCTTGCTCTTCCTCCTAGATGCCGTCGCTGTGGACTTTATCCGGCGGTTCGCGGTGGAGATTCTGCCGGAGTTAGCGGCGGCGGTGAACCGGAGCTCAAATCTCGAAATGACGAAAATGCCACTAGTAGTGTTGGTAATGATCATGTGAATAGTTCGTCTACAAGTAGTCCAAGTCACAATCAACAGCCCAGAGATAATATTGGATTCCTTCCATGA 681 0.514 MTRTLKSTANSTSVAAAAAITAAAPPPEAVALESDFVVILASLLCALICTVALIAVCRCTWFRRGGSGSNGGFPGQSLANKGLKKKVLQSMPKFAYIDGRNSEKWLATSECAICLAEFAGEDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILALPPRCRRCGLYPAVRGGDSAGVSGGGEPELKSRNDENATSSVGNDHVNSSSTSSPSHNQQPRDNIGFLP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1674 226 MobiDBLite consensus disorder prediction 192 220 - -
Mibi10g1674 226 SMART ring_2 111 152 IPR001841 -
Mibi10g1674 226 MobiDBLite consensus disorder prediction 175 226 - -
Mibi10g1674 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 157 IPR013083 -
Mibi10g1674 226 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 24 166 - -
Mibi10g1674 226 SUPERFAMILY RING/U-box 87 166 - -
Mibi10g1674 226 FunFam E3 ubiquitin-protein ligase ATL6 74 159 - -
Mibi10g1674 226 CDD RING-H2_PA-TM-RING 110 153 - -
Mibi10g1674 226 Pfam Ring finger domain 110 153 IPR001841 -
Mibi10g1674 226 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1674 Mibi-ChrMibi10 37951508 37952188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1674 31 165 C3H Transcription Factor Family AT1G20823 63.194 3.65e-55 173