Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1657 ATGCCTAACATGAATCCACCGCCATTCTTCTCCTTCTCCACCGCCACCATCGCCGCCGTAATATGCACTCTGCAACTTCTTTTCCCGGCGGCTATGTCACAACCCCAGAACATAAAAACATACAAATACATCTTCGGCCCTTTTGATGTATCAAACTACACAACATTGAAAGTGATCCCACCAGCAGCAATCAACTTGGGAGCTCTCCAAGTAACTCCAGACACAGCCGGCAACGTTAACCTCACAAACACCACAGGAAGGATCCTTTTCAAGCAACCCTTTAAGCTTTGGGAAGAAGACACCGCTAAAGTCGCTTCCTTTAGCACTTCATTCCTCATCAATGTCTATAGAGTCAATAATGCCACCCCTGGTGAAGGTGTTGCCTTTGTTATTTCACCAAACCTCGACCTCCCCAAAAACAGCCATGGCCAATACCTCGGACTCACCAACTCCACCACAGATGGCAGAGCCGACAATCACCTCGTTGCCGTCGAATTAGACACAGTCAAGCAAGATTTCGACCCAGATGACAATCACCTCGGACTTAACATCAACAGTGTCAGATCAAAAACCAATGTTTCTCTGTCTCAGTTTGGAATCCAGATCGCTCCGGATAGTGCTAAATACTATGTAATCTGGATAGATTACAATGGTTTAAGCAAGAGAATCAATGTGTTCATCAGAGAACAACCAGATAGGAATGGGGTTATAGTGTCAAAACCTGACAAACCGGTGTTGACTTCAGATCTAGATCTTAAAGCCATTGTGAAACAGAGTTCTTACTTTGGGTTCTCTGCTTCCACTGGAACACTCTTCCAGTTAAACTGTGTTCTTAGATGGAACATGACGGTGGAGGTTCTTTCAGAAAACAAGAAAAAGTTGCGATCTTTAAAGATGGGTTTGGGAATTGGGGTGCCATTGATGGTTTTGATGCTTGTGGGGCTTGGTGGGTTTGTGTTTTATATTTATATGAAGAAGAGAAGGAGGAGGTTGGATGATGAACACATATTGGGGACATTGAAGAGCTTGCCAGGAACGCCTAGGGAGTATTCGTTTAAGGAATTGAAGAAGGCGACGAGTAATTTCAGTGAAAAGAACAAGCTTGGGGAAGGAGGGTATGGGATGGTGTACAGAGGAATTTTGCAGAAAGAGAATAATTTGGAAGTTGCTGTGAAGAAGTTCTGCAGAGATGCCATGAAATGCAAAGATGATTTCTTGGCTGAACTCTCCATTATCAATCGTCTTCGTCATAAGCATCTTGTTCGGTTATTAGGTTGGTGTCACAAGAATGGAGTGTTAGTGTTGGTGTATGAGTACATGCCCAATGGCAGCTTAGACAATCACCTTTTCTTTGATGAAACAAAATCCACAACTCCTCTAAGTTGGCACCTACGTTACAAAATCATCTCAGGTGTAGCTTCAGCACTTAACTACCTTCACAATGAGTATGACCAAAAAGTAGTCCACAGAGATCTCAAAGCAAGCAACATCATGTTGGACTCTGACTTCAACGCCCGCCTGGGCGACTTTGGCCTCGCTAGAGCCATTGAGCACGAGAAAACCTCGTATGCCGAGGTTGAAGGAATCCATGGCACTATGGGATACATCGCTCCAGAGTGCTTCCACACAGGGAAGGCGACACGACAAACAGATGTGTTCAGTTTTGGGGCAGTTCTTCTGGAAGTGGTGTGCGGGGAGAGGCCATGGACAAAGAGGGAAGGGTATCAATTGTTGGTGGATTGGGTTTGGTATTTGTATGGTGAAGGTAGGATTCTTGAGGCAGTGGATAAAAGGCTTGGGAATGAGTATGAGGTTGAAGAAGCAGAGAGAATATTGAAATTAGGATTAGCTTGTTCTCATCCAATTGCTGCTGAGAGGCCAAAGATGCAAAGTATAGTTCAGATTATAAGTGGGGCAGTTCCTGTGCCTTATGTGCCTCCAAGCAAGCCTGCGTTTATTTGGCCTGCTCTTGATTTTGGAAGCTTTATTAGTGATCTCACCACACCATCTTCTACCACTCAAAACACACCTTTTCATAGAGATTCAGATTCAGATCCTCTACATTCATCAAAATGA 2076 0.4427 MPNMNPPPFFSFSTATIAAVICTLQLLFPAAMSQPQNIKTYKYIFGPFDVSNYTTLKVIPPAAINLGALQVTPDTAGNVNLTNTTGRILFKQPFKLWEEDTAKVASFSTSFLINVYRVNNATPGEGVAFVISPNLDLPKNSHGQYLGLTNSTTDGRADNHLVAVELDTVKQDFDPDDNHLGLNINSVRSKTNVSLSQFGIQIAPDSAKYYVIWIDYNGLSKRINVFIREQPDRNGVIVSKPDKPVLTSDLDLKAIVKQSSYFGFSASTGTLFQLNCVLRWNMTVEVLSENKKKLRSLKMGLGIGVPLMVLMLVGLGGFVFYIYMKKRRRRLDDEHILGTLKSLPGTPREYSFKELKKATSNFSEKNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDAMKCKDDFLAELSIINRLRHKHLVRLLGWCHKNGVLVLVYEYMPNGSLDNHLFFDETKSTTPLSWHLRYKIISGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARAIEHEKTSYAEVEGIHGTMGYIAPECFHTGKATRQTDVFSFGAVLLEVVCGERPWTKREGYQLLVDWVWYLYGEGRILEAVDKRLGNEYEVEEAERILKLGLACSHPIAAERPKMQSIVQIISGAVPVPYVPPSKPAFIWPALDFGSFISDLTTPSSTTQNTPFHRDSDSDPLHSSK 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1657 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 287 IPR013320 -
Mibi10g1657 691 Gene3D - 40 301 - -
Mibi10g1657 691 Gene3D Phosphorylase Kinase; domain 1 347 439 - -
Mibi10g1657 691 CDD lectin_legume_LecRK_Arcelin_ConA 67 284 IPR001220 GO:0030246
Mibi10g1657 691 Pfam Protein tyrosine and serine/threonine kinase 365 634 IPR001245 GO:0004672|GO:0006468
Mibi10g1657 691 MobiDBLite consensus disorder prediction 668 691 - -
Mibi10g1657 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Mibi10g1657 691 SMART serkin_6 362 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1657 691 ProSiteProfiles Protein kinase domain profile. 362 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1657 691 SUPERFAMILY Protein kinase-like (PK-like) 344 670 IPR011009 -
Mibi10g1657 691 Pfam Legume lectin domain 43 292 IPR001220 GO:0030246
Mibi10g1657 691 FunFam probable L-type lectin-domain containing receptor kinase S.5 347 439 - -
Mibi10g1657 691 PANTHER - 76 640 - -
Mibi10g1657 691 FunFam probable L-type lectin-domain containing receptor kinase S.5 440 641 - -
Mibi10g1657 691 Gene3D Transferase(Phosphotransferase) domain 1 440 641 - -
Mibi10g1657 691 CDD STKc_IRAK 368 636 - -
Mibi10g1657 691 ProSitePatterns Protein kinases ATP-binding region signature. 368 393 IPR017441 GO:0005524
Mibi10g1657 691 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1657 Mibi-ChrMibi10 37728016 37732144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1657 31 652 Receptor kinase-like Gene Family AT5G55830 37.424 7.23e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi10g1657 PK_Tyr_Ser-Thr 1.2e-49 CL0016