Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1618 ATGGGATCCAGTAGTAGCAAAGCCACTTCCTCTTGCAATTCGTCCTCGTCTTCCAGCAGTTTCCGGAAGGCTCGATCTAAGAAAGAGCATAGAGGATTTCAGTCGCATTGTCTGGGAATAGCTTCTGGATCTCATGACGAACAGAATAAAGGAAATGGCAGTGCTGTCACACACAACTGTTGCACTGTGACACGCTCAAATGAGATGAAATCAAAGTCATTTAGAGATGATAAAATGAAAAAATCTCATGACATGCCTCGCATGCCTTCCAACATTGACCTCAATGAGTGGGCTCAAACAAGCATCTCCAGTAATTCCTCCAGAACTCGTAGCCGATCTGCTAGTACCTCTTCAACTGGTAGTCGATTTTTGTCTCGGTTTAGCTTTATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACCACCAGTTTAGGGTCATCAAGGTCTTGCCATGTTTCTTCTACAACAATGTCAATATTCAACAATGAAGATGATCTTAGTATGCATCCAGGACCCACTGGCAGCTTGGTTAATAGAAATGAATCTCAACAATGTAATGACTTGTTTCCTTCTTCTTTTGGTAACCGTATGCCTATACAGCAATATGGAGATACTCATAATAGTTTATGTTATAATTTTTCAGCCTCAGATTCATCTGGCAACTTGCAGAGTAATTCCTCAGTTTCTTCTATGCATAATGTGGTTAGAGATGGAAATGGTGTATGTGAAGGGCAAAATGTTGAGGGCCGACAAAATGGAGCTCGAGAGCCTGCTGAACGGAATTTTCAGTATAGCCGAACTCTAAGTGTTGGAAGGCTTCGTAATAGAGTTCTCCGTCAATCAACTTTATCTGATGTCAGCTTTTGCCCCCAGCAACAAGAGAGAGAAGCAAGGGATTCTAGGGAGGATAGTGAAAGACATGCAGGGGAGGGAGGTTCAAGAGTATTACCATCTTTTAGTAATACTGTAACTTCTTCTACTGTGTCTGGTTATCCTCCATCCAGTATGTCTAACTCTTTATTCAACATCCAAGACTATGAAATTGAGAATTCGAGGTCAAGAGGAGCAAGGTACCAAGATCTGATGGAACACAGATCCAACTTCCTTGAACGGAGAAGAAGAATAAGATCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTATCTGGACATGACAGATCTTGTATCTTGTCTGGTCAACATAGAAATGGTCATTGTACATGCCGAATTGGTAGTCGTGATACTAGTTCAATTGATGATACTGGTACTAGAGCTAGCATCTCAAGAATTGTCATGCTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGCGGTTTTGTCTTCTCGCCCTTCTGTGTCTTCCATTGGATCTGTTCCTGCACCTAATGATGTTGTGGAGTCTTTGCCTGTCAGATTATACACAAAGTTGCACAAACATCAAGAGGATGCTGCCCAATGCTATATATGCCTCGTGGAGTATGAGGATGGAGACAGCATGCGTGAGCTGCCTTGCCATCACCAATTTCATAGAACTTGCATAGACAAGTGGCTCAAGGAAATTCATAGGTATGAAGGGTATGTCCACTATGTCGGAGGGACATCTGCATATCTGATTCACTGTCAATGGAGGACTAAGTGGCCACTTGTTCAAAATCTCCCAAAGACCTCAGAAGCTCAATGTTTGTGCAACCCCCCAAGACAAAAAGCCAAGCAGTTCATTTCTTTTCTGCCAGTATTTTCATTTTTGCCCAAGGATTATTTACTCTCATTGCTCAATGTAACTTCAAAATATGGCAGAAATGGACTGAACTACTTCTGCTATCTGTGCCTTCATCATTTGATGAAACTCAGAAAAAGAGTGATAGATGAGGATTATGTCTTTTGA 1911 0.4197 MGSSSSKATSSCNSSSSSSSFRKARSKKEHRGFQSHCLGIASGSHDEQNKGNGSAVTHNCCTVTRSNEMKSKSFRDDKMKKSHDMPRMPSNIDLNEWAQTSISSNSSRTRSRSASTSSTGSRFLSRFSFIPGNISFRLSRTTSLGSSRSCHVSSTTMSIFNNEDDLSMHPGPTGSLVNRNESQQCNDLFPSSFGNRMPIQQYGDTHNSLCYNFSASDSSGNLQSNSSVSSMHNVVRDGNGVCEGQNVEGRQNGAREPAERNFQYSRTLSVGRLRNRVLRQSTLSDVSFCPQQQEREARDSREDSERHAGEGGSRVLPSFSNTVTSSTVSGYPPSSMSNSLFNIQDYEIENSRSRGARYQDLMEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGHCTCRIGSRDTSSIDDTGTRASISRIVMLAEALFEVLDEIHQQSAVLSSRPSVSSIGSVPAPNDVVESLPVRLYTKLHKHQEDAAQCYICLVEYEDGDSMRELPCHHQFHRTCIDKWLKEIHRYEGYVHYVGGTSAYLIHCQWRTKWPLVQNLPKTSEAQCLCNPPRQKAKQFISFLPVFSFLPKDYLLSLLNVTSKYGRNGLNYFCYLCLHHLMKLRKRVIDEDYVF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1618 636 ProSiteProfiles Zinc finger RING-type profile. 495 525 IPR001841 -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 1 28 - -
Mibi10g1618 636 FunFam Putative RING zinc finger domain superfamily protein 464 534 - -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 284 333 - -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 70 87 - -
Mibi10g1618 636 CDD mRING-H2-C3H2C2D_ZSWM2 494 527 - -
Mibi10g1618 636 Pfam Ring finger domain 494 528 IPR001841 -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 70 96 - -
Mibi10g1618 636 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 458 532 IPR013083 -
Mibi10g1618 636 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 532 - -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 315 333 - -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 1 21 - -
Mibi10g1618 636 SUPERFAMILY RING/U-box 473 528 - -
Mibi10g1618 636 SMART ring_2 495 571 IPR001841 -
Mibi10g1618 636 MobiDBLite consensus disorder prediction 292 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1618 Mibi-ChrMibi10 37222545 37227166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1618 100 530 C3H Transcription Factor Family AT5G45290 48.292 1.01e-101 318