Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1606 ATGGGCGTTTGTCTGATAAAATGGCAATGGCCATGGCTTCTATATGTTCAGCTGATATGTTGTGTAATCTATAGGAATGAAGCAATCACACCTGATGGAGAGGCGCTTCTTAGCTTTAGGACAGCAGTTAGCCCCAATAGTGACCTGTTGCCTTGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTAAAATGTGATCTAAAAACCAAGAGAGTGACAAATCTGTTTCTGGATCATCTCAAATTAAGTGGGTCTATTTCAGCTGACCTTGGGAAGCTAGAGCATCTGAGGAGTCTTGCTCTTAACAACAACAACTTATATGGGACTATTCCATCAGCATTAGGAAATTGCACTGAATTGCAAGAAATATATTTGCACAGTAATTACCTTAGTGGAGTGATCCCAAGTGAAATCGGAAATCTTTCCCAACTTCAAACTTTGGATATATCAAGTAACTCCCTTAGTGGGAGTATTCCTCTGTCGCTTGGGAAATTATATAATCTTAAAAATTTCAATGTGTCATTCAATTTTCTGGTTGGACTAATACCTTTGGATGGTGTGCTTGCCAACTTCACTGAAGGCTCCTTTCTTGGAAATCTTGGTCTTTGTGGAGTGCAAATCAATACAACATGTAAAAATGATGGTTTGCCTAATTCCAATCCTCAATCTTCAGCATCAGACCAAAATCAAAATGGAAAAAGGAAAGACTCTGGCCGGCTGCTTATTAGTGCATCAGCGACTGTGGGTGCACTACTTTTAGTGGCACTAATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACAGAGAAAGTCTAGCAATGGATGTCTGTGGAGGGGCATCTATTGTTATGTTTCATGGAGATCTACCATATTCTTCAAAAGATATTATTAAAAAACTAGAGACTTTAAATGAGGAACACATAATTGGTTGTGGAGGATTCGGAACAGTTTACAGGCTTGCAATGGATGATGAGAATGTATTTGCTTTGAAAAGGATTGTAAAGTTAAATGAGGGCTATGATCGATTTTTTGAGAGAGAGCTTGAAATTCTTGGAAGCATAAAACACAGATATCTTGTGAACTTAAGAGGATATTGCAATTCACCTTCATCGAAGTTGTTGATATATGATTACCTACCTGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGATCTGAGCAACTCGATTGGGATTCACGCTTGAATATCATCTTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACATCGTGACATAAAATCAAGCAATATTTTGCTTGATGGAAACTTGGATGCTCGAGTCTCTGACTTTGGACTTGCCAAACTTCTGGAGGATGAGGAATCTCACATCACTACTATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAATACATGCAAAGTGGTAGAGCAACCGAAAAGACTGATGTTTATAGTTTTGGTGTCTTGGTACTTGAAGTGTTGAGTGGAAAGCGACCGACAGATGCATCATTCATTGAGAAGGGCCTCAATATTGTCGGTTGGTTAAATCATTTAATAACCGAGAACAGAGCAAGAGATTTAGTTGACCAACAATGTGAAGGAGTGCGGGCAGAGAGCCTGGATGCGTTGCTTTCTGTAGCTATACAGTGTGTATTGTCGAGTCCAGACGATCGACCCACAATGCACAGAGTGGTCCAATTGATTGAATCAGAGGTGATGACCCCATGCCCAAGTGACTTCTATGACTCCAACTCTGAGTAG 1785 0.405 MGVCLIKWQWPWLLYVQLICCVIYRNEAITPDGEALLSFRTAVSPNSDLLPWRPEDPDPCKWKGVKCDLKTKRVTNLFLDHLKLSGSISADLGKLEHLRSLALNNNNLYGTIPSALGNCTELQEIYLHSNYLSGVIPSEIGNLSQLQTLDISSNSLSGSIPLSLGKLYNLKNFNVSFNFLVGLIPLDGVLANFTEGSFLGNLGLCGVQINTTCKNDGLPNSNPQSSASDQNQNGKRKDSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNHRESLAMDVCGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYRLAMDDENVFALKRIVKLNEGYDRFFERELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNHLITENRARDLVDQQCEGVRAESLDALLSVAIQCVLSSPDDRPTMHRVVQLIESEVMTPCPSDFYDSNSE 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1606 594 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1606 594 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Mibi10g1606 594 MobiDBLite consensus disorder prediction 218 233 - -
Mibi10g1606 594 Gene3D Phosphorylase Kinase; domain 1 285 384 - -
Mibi10g1606 594 ProSiteProfiles Protein kinase domain profile. 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1606 594 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 385 587 - -
Mibi10g1606 594 ProSitePatterns Protein kinases ATP-binding region signature. 315 341 IPR017441 GO:0005524
Mibi10g1606 594 SUPERFAMILY L domain-like 43 196 - -
Mibi10g1606 594 Pfam Protein kinase domain 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1606 594 SUPERFAMILY Protein kinase-like (PK-like) 294 576 IPR011009 -
Mibi10g1606 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Mibi10g1606 594 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Mibi10g1606 594 Gene3D Ribonuclease Inhibitor 30 214 IPR032675 -
Mibi10g1606 594 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 577 - -
Mibi10g1606 594 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Mibi10g1606 594 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 190 - -
Mibi10g1606 594 MobiDBLite consensus disorder prediction 218 237 - -
Mibi10g1606 594 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 283 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1606 Mibi-ChrMibi10 37130816 37137415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1606 1 585 Receptor kinase-like Gene Family AT2G35620 73.720 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mibi10g1606 Pkinase 1.7e-45 CL0016