Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1598 ATGTCACTTCTTAGCAGATTCTTTTACCGGAGACCCCCTGATGGTTTGCTAGAATTTGTCGATAGAGTATACGTTTTCGATTCTTGCTTTTCAACTGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATTAATGAGTTACATGAAGAATTCCCGGACTCTTCCTTCTTCGCTTTTAATTTCCGTGAAGGGGAGAAACGTAGTCAATTTGCTGAAATTCTTTGTGAGTACGATGTTACTGTGATGGATTATCCTCGACAGTATGAGGGTTGCCCTATTCTTCCAGTGTCTTTGGTTCAACATTTTCTTCGTGTCTGTGAGAGTTGGCTTTCACTTGGGAATCAACAGAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCTCTCTTGGGGTTTCTCTTAGCTAGCTTTCTGATTTACAGAAGAGTACACAGTGGTGAACGGAAGACACTGGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTATTGTCGCCTTTGAACCCGTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGGAGAAACATTGCTCCTGAGTGGCCGCCGCCTGAGAGAGCTCTTTCTCTAGATTGTGTCATTCTCAGAGCCATTCCTAGTTTTGATTCCCAGAACGGATGCAGACCCATGATCCGCATTTTTGGTAGAAATTTTCTCAGTAAGGGTGGGCTTTCTACCCAGATGCTCTACTCCATGAACAAGAAAAAGAAAACCTTGAGGCACTACCGTCAGGCAGAGTGTGATGTGATCAAGATTGACATACAATGTTTAGTGCAAGGAGATGTGGTATTGGAGTGTGTCCACTTGGACTTGGATCCAGAAAGGGAAGTAATGATGTTTCGCATAATGTTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTACCCAAAAGGCTTCCGAGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATATCTCCTCCAAAAGCCCCAACAACGGTATTAAATGGCGAGGAGAAAGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGCGGTGTGGAGTGGCTTGATAGCGGTGAAGATGCTGCAGTCTGGTTGCTTAAACAACTTTCTGTGTTAAATGATGTCAAAGAACTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTACTCATCACCTGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCGAAGTATCCTACTGATATTTCCAAGTTATTGGCACCTGAAAACCCTGATTCAGTTCATTTAGATTTTGAAAGTGATGGTAGAAATAATGTACATCTTACTTCAGAACCTCCAGATCCATTGACTGAAAGTGCTCCACCGTCTCATCATTCTCAGAGTAATGAATATCCTCACAATTCATCTCCACCGTGGCCACCAGCACCAGCACCTCCATTTACTCCACCTCTTTCTAATAACAGTGGAGATCCTTCCTCATCTCCTACAGCATCTTCAGCAAACTGCAAGAGCCCAATACCACCCGCACCGCCTCCTCCTCCACTACCATTTGTCTCTTGCAAAACTTTGCCACCTCCCTCACCACCTCCACCACCCACTATGGGGAGTAAAATTAATGAGGTGCCACAGCAATCGTTACAGCCACAGCCTCCTCCTCCTCCACCAATGCCACCTCCACTATCAAACATTTCAACTTCATCTAGTACTAAGCTTGTCCAAGTGGCAAGACCTCCACCTCCACCACCACCACCACCTCCTCCTCCTCCCTCCTCCTCTCCTGCCCTAGCTCATAACACTCCTAGACCACCTCCACCCCCACTACCATCACCTCCTATAGCAAAGCCTCCAAATGCACCACCTCCACCACCCAGTCAAGAAACAATGCCGCCTCCACCACCACCAAATCGAAGCGCAACACCACCACCCCCTCCGCCTCCGCCTCCGCCTCCACCACCTAGTCGAGGTGTAACGCCACCACCCCCTCCACCTCCACCTCCACCTCCTGGCCGAGGTGCATCAGCACCTCCACCTCCACCTCCAACACCTGGCCAATGTGCAACAACACCTCCACCTCCACCTCCACCACCTGGCCGAGGTGCAACAGCACCTCCCCCTCCACCTCCACCCGGTCGAGGTGCAATTCCACCTCCACCTGCACCACCACCACCACCTGGTCGTGACACAAAGCCACCTAGTCATGGTGCAGCACCGCTGCCACCTCCACCACCACCCGGTCGGGGTGCACCACCTCCCCCACTTGGTCGAGGTGCAACGCCACCTCCACCTCCACCACCTGGTTGGGGGGCACCACCACCTCCTCCCCCTCTTGCAACCAAGGGATCTGGTGTGCCGCCGCCGCCACCCCTATCCACTACCAAAGGCAAACCTCTAGCATCAACGAATATTGGAAGAGGTCGAGGTTCTAGTGGGACTGCTAATGCCCCTAAGAAAGCTTCATTAAAGCCCCTACACTGGGTGAAAGTTACACGAGCAATGCAAGGGAGTCTATGGGCTGATTCACCGAAACAGGATAATCAATCAAGGCCCCCCGAAATTGATATATCAGAACTTGAGAGTCTATTTTCAGCAGCGTCTGCTTCTGATGTGAACAGTACCAAAGGTGTAGGTCGGCGCGGTTCTAATATCAATAAAACTGAGAAAGTTCAATTGAAAGCAGTTCTGGCATTGGATTCTTCTGCTTTGGACATTGATCAGGTTGAGAATCTCATTAAGTTCTGTCCCACAAAGGAAGAAATGGAAATGTTGAAGGTGAATGATTTGAGATTAAATTTGAACACAATCAATGATGCTGCTAGAGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTAAATCAGGGAACAGCCCGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGATACTCGAGCAAGGAATAACAAAATGACATTGATGCATTATTTGTGTAAGATCCAACTAAAAGCATTGGCTGAAGAGATGCAAGCGGTAAGCAAAGGTCTAGAAAAAGTTGAGCAAGAACTTACTACTTCAGAAAATGATGGTGTTGTATCTGCAGGCTTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGTTAGGTCACTCATATCATTGTATTCTGAAGTGGTAAGTCTTGTCAACATATATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCCCGGTGCCCCTTTGAGCAAGTGACTCAAATCCTGGCTGTCTTTGTGAAGATGTTTAACAAATCAAAGGAGGAGAATGAAAGGCAGGCAGACGCGGAAAAGAAGAAATTGGAGAAAGAAGCCATGAAGGAACAACGAACACCTGTAAATACAAATTCAAAAAAAGATGTTCACTAG 3498 0.4663 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIINELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLVQHFLRVCESWLSLGNQQNVILLHCERGGWPLLGFLLASFLIYRRVHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPMIRIFGRNFLSKGGLSTQMLYSMNKKKKTLRHYRQAECDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRIMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPADSEDENNESSTADSSDEAFDVIPKYPTDISKLLAPENPDSVHLDFESDGRNNVHLTSEPPDPLTESAPPSHHSQSNEYPHNSSPPWPPAPAPPFTPPLSNNSGDPSSSPTASSANCKSPIPPAPPPPPLPFVSCKTLPPPSPPPPPTMGSKINEVPQQSLQPQPPPPPPMPPPLSNISTSSSTKLVQVARPPPPPPPPPPPPPSSSPALAHNTPRPPPPPLPSPPIAKPPNAPPPPPSQETMPPPPPPNRSATPPPPPPPPPPPPPSRGVTPPPPPPPPPPPGRGASAPPPPPPTPGQCATTPPPPPPPPGRGATAPPPPPPPGRGAIPPPPAPPPPPGRDTKPPSHGAAPLPPPPPPGRGAPPPPLGRGATPPPPPPPGWGAPPPPPPLATKGSGVPPPPPLSTTKGKPLASTNIGRGRGSSGTANAPKKASLKPLHWVKVTRAMQGSLWADSPKQDNQSRPPEIDISELESLFSAASASDVNSTKGVGRRGSNINKTEKVQLKAVLALDSSALDIDQVENLIKFCPTKEEMEMLKVNDLRLNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKIQLKALAEEMQAVSKGLEKVEQELTTSENDGVVSAGFRKVLKNFLDIAEAEVRSLISLYSEVVSLVNIYSLSQYFGEDPARCPFEQVTQILAVFVKMFNKSKEENERQADAEKKKLEKEAMKEQRTPVNTNSKKDVH 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1598 1165 Coils Coil 1031 1058 - -
Mibi10g1598 1165 Coils Coil 1127 1154 - -
Mibi10g1598 1165 SUPERFAMILY Formin homology 2 domain (FH2 domain) 920 1153 - -
Mibi10g1598 1165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Mibi10g1598 1165 SMART PTEN_C2_2 198 943 IPR014020 -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 407 433 - -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 822 844 - -
Mibi10g1598 1165 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Mibi10g1598 1165 Gene3D - 197 342 - -
Mibi10g1598 1165 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Mibi10g1598 1165 PANTHER FORMIN-J 1 1161 - -
Mibi10g1598 1165 Gene3D Formin, FH2 domain 952 1158 IPR042201 -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 1130 1165 - -
Mibi10g1598 1165 Coils Coil 953 973 - -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 445 850 - -
Mibi10g1598 1165 Gene3D Formin, FH2 domain 839 951 IPR042201 -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 533 565 - -
Mibi10g1598 1165 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 603 821 - -
Mibi10g1598 1165 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 574 590 - -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 515 532 - -
Mibi10g1598 1165 SMART it6_source 531 1163 IPR015425 -
Mibi10g1598 1165 ProSiteProfiles Formin homology-2 (FH2) domain profile. 952 1152 IPR015425 -
Mibi10g1598 1165 MobiDBLite consensus disorder prediction 496 514 - -
Mibi10g1598 1165 Pfam Formin Homology 2 Domain 1028 1127 IPR015425 -
Mibi10g1598 1165 Pfam Formin Homology 2 Domain 952 1029 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1598 Mibi-ChrMibi10 37052379 37063253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1598 1 439 FH2 protein (formin) Gene Family AT1G31810 77.904 0.0 777