Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1591 ATGATTTCGTTTCATCGCGTCAAATTCTGTAACGTCGTCGTCACCATCTTAGAATCAAATGAATTTCGTTGCTTCATATTGCAAACCGTTTCTGTTCCTAAGATATTCTCTCAGAAGAGCGAGAATCGAGCTCTGTATGCAAATGGAAATCAAATGAATGCTGCAGAAGTTGAAGCCAAACTTGACCAAGGAAATGTTGAAGACGCTGAATCTGCATTGAAAGAGGGTTTATCAATCACTTCCGAGGAAGCAAGAACTCTTATAGGGAAGCTAGAATATCAAAGAGGAAATTATGCAAGTGCTCTTCGTGTGTTTGATGGGGTTGATCTCCAAGCTGCCCTTCAGCAATTACAATCTTTAGTTTCTGACAAATCATTGGCCAAGAAAGCACCTTCCTTAAAAATCCCTCGGCATGCTGCTAGTTTGATGCTTGAATCCATCTACTTCAAAGCAAAAACTCTACGAAAGCAGGGCAATATAGCTGAAGCTATCGTTGAATGCAAAAGTGTGCATGAGGGTATTGAGAAGACATTCAGCCAGGGTGTATCTGATATTCAATTGGATGACACATTGCAAGAACTTATCAGTGGCATTGTAGGACTTCTTCCAGAGCTTACGAAGCAAGCAGGTAGATATCAAGAGGCACTGTCTGAATATAGACGCGCTCTTCAACTTCTAAGTCAATGGAACTTTGATACCGATGGCTGTGCTAGAGTTCAGAAAGGACTTGCCATGCTTTTGCTGTATGGTGGGTTCGAGGCTAGCCCACCCAAGGCACTTGATCAGGGCGAGGGGCTTTATGTACCTAAAAACAATCTCGAAGAGGCAATTCTGCTTCTAATGCTTGCTGTGAGGAGACTTTGCATTGATAAGTCCAAATGGGATCCTTCAGTGATGGAGCACCTGACTTTTGCACTTTCTATATGTGGCCAAACTTCTGTTTTAGCAAAGCAACTTGAAGAGTTGATGCCTGGATTATATCATCGTATTGATCGTTGGAATCTTTTAGCTTTATGTCTCTATGGAGCAGGACAAAAGGAAAGTGCTTTGGATCTACTTAGGAAATCTTTGCACAAACATGAGAGACCAAATGACATTGAAGCATTGTTAGTGGCTGCCAGGATCTGCAGTGAGAATCCTTTTCTTGCTGCTGAGGGAGAGGGGTATGCACAAAGGGCATTCAACAATGCTAAGGGCATAAACGAGCATTTAAAAGGTGTTTGTCTTAGAATGTTGGGACTTTGTCTGGGAAAAGAAGCTAAGGTTGCTTCCTCTGACTTTCAAAGGTCTAATCTTCAGTCTGAAGCTCTGAAATCATTAGAAAGGGCGATGGGATTTGAGTATAACAACTCTGATCTAAGTTTTGAGCTGGGAGTTCACCATGCATTACACAGAAATCTGACAACTTCTTTGCGCTATGCAAAGCAGTTCTTTGATGAAACAGGAGGATCTATATTGAAAGGTTGGAGATTGATTGCTCTGATTTTGTCCGCTCAACAACGATTCACTGAGGCTGAGGTGGTGATAAATGCTGCTTTAGATGAGACCACAAGATGGGAGCAAGGGCCACTGCTTAGACTGAAAGCAAAGCTCAAGATTTCCCAATCACAACCCATGGATGCTATTGAAACTTATAGGTACCTCCTTGCATTGATTCAAGCTCAAAAGAATTCCTTTGGGCCTATGAGGGTAAATACACAGGTTCAAGATGATGTGAAGGAGATCGATGTTTGGCATGGTCTGGCAGATTTATATGCAAGCCTTTCTCACTGGCAGGATGCTGAAGTTTGTTTGCAAAAGGCCAGAGAAATTGAGGAGTACTCAGTAGAAACAATGCACATTGAAGGTCTTTTGCATGAAGGACAAAGACAAAAACAAGAGGCTATTTCTGCTGTCACGACAGGGCTCCTGTTTGGACCATACCATGTACCAAGCAAGATCCAGATGGGCGCTTTGCTGCTGAAATCGGATTCGAAGTCAAAATCTTTGCCTTTAGCCAGAAGCTTGCTTTCTGACGCACTTCGATTAGAACCCACAAACCGTCTGGCTTGGTTTCACTTGGGAAGAGTTCACAAGTACGATGGCCGAATAGGTGATGCCGCCGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCTGATCCTGTTGAATGCTTCAGCACTTTGCTTTGA 2172 0.4296 MISFHRVKFCNVVVTILESNEFRCFILQTVSVPKIFSQKSENRALYANGNQMNAAEVEAKLDQGNVEDAESALKEGLSITSEEARTLIGKLEYQRGNYASALRVFDGVDLQAALQQLQSLVSDKSLAKKAPSLKIPRHAASLMLESIYFKAKTLRKQGNIAEAIVECKSVHEGIEKTFSQGVSDIQLDDTLQELISGIVGLLPELTKQAGRYQEALSEYRRALQLLSQWNFDTDGCARVQKGLAMLLLYGGFEASPPKALDQGEGLYVPKNNLEEAILLLMLAVRRLCIDKSKWDPSVMEHLTFALSICGQTSVLAKQLEELMPGLYHRIDRWNLLALCLYGAGQKESALDLLRKSLHKHERPNDIEALLVAARICSENPFLAAEGEGYAQRAFNNAKGINEHLKGVCLRMLGLCLGKEAKVASSDFQRSNLQSEALKSLERAMGFEYNNSDLSFELGVHHALHRNLTTSLRYAKQFFDETGGSILKGWRLIALILSAQQRFTEAEVVINAALDETTRWEQGPLLRLKAKLKISQSQPMDAIETYRYLLALIQAQKNSFGPMRVNTQVQDDVKEIDVWHGLADLYASLSHWQDAEVCLQKAREIEEYSVETMHIEGLLHEGQRQKQEAISAVTTGLLFGPYHVPSKIQMGALLLKSDSKSKSLPLARSLLSDALRLEPTNRLAWFHLGRVHKYDGRIGDAADCFQAASMLEESDPVECFSTLL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1591 723 Gene3D Tetratricopeptide repeat domain 201 481 IPR011990 GO:0005515
Mibi10g1591 723 SUPERFAMILY TPR-like 208 362 IPR011990 GO:0005515
Mibi10g1591 723 PANTHER PROTEIN NPG1 37 720 IPR043376 -
Mibi10g1591 723 SMART tpr_5 486 519 IPR019734 GO:0005515
Mibi10g1591 723 SMART tpr_5 681 714 IPR019734 GO:0005515
Mibi10g1591 723 SMART tpr_5 609 642 IPR019734 GO:0005515
Mibi10g1591 723 SMART tpr_5 330 363 IPR019734 GO:0005515
Mibi10g1591 723 SMART tpr_5 575 608 IPR019734 GO:0005515
Mibi10g1591 723 SMART tpr_5 144 177 IPR019734 GO:0005515
Mibi10g1591 723 Gene3D Tetratricopeptide repeat domain 493 661 IPR011990 GO:0005515
Mibi10g1591 723 SUPERFAMILY TPR-like 525 712 IPR011990 GO:0005515
Mibi10g1591 723 Gene3D Tetratricopeptide repeat domain 35 183 IPR011990 GO:0005515
Mibi10g1591 723 Pfam Tetratricopeptide repeat 56 106 - -
Mibi10g1591 723 Gene3D Tetratricopeptide repeat domain 662 719 IPR011990 GO:0005515
Mibi10g1591 723 SUPERFAMILY TPR-like 208 514 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1591 Mibi-ChrMibi10 36960986 36964551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1591 36 723 Calmodulin-binding Proteins AT2G43040 62.034 0.0 852