Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1578 ATGAACTCTCCGCCGATGTGGACGGCGGTTCAACCACCGTTCACGGTGGCTCAATGGCAGGAGCTTGAACACCAGGCTCTCATCTTCAAATACCTCAAGGCTGGACTCGCCGTTCCTCTCGACCTCCTCATTCCCATTCGCAAGAGCCTCGAACTCATGCCCCCTAAGCTCCTTCATCACCCCTCTCTGGGTTATTGCTCGTATTACGGGAAGAAGATAGATCCAGAGCCAGGTAGGTGTAGGAGGACGGATGGGAAGAAGTGGAGATGCTCGAGGGATGCGCATCCTGACTCTAAGTACTGTGAGCGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACAACAACAACAACAAGCTGCTTCTCAGTCTTCGTCCAATTCGGCATCATCGGACGTTGCTGCTGCTGGTGGAAGCAGGAGTGTTGTCTCTGGAAGCTTCCAGAGCTTGACCTTGCACGGAAATGGTGCTCGTGAGGGTTTCAACCGTGGAAATAATGTATCACAGCTTCAGATACAGTCTCTTCCTGGTGAGATTAACAAGAAAGAGTACAGGTTTGGACTGAACTCTGAAGTAGATGAGCACAACTTCTTACAGAAAGGACTCGGAAGCACGAGCTATCTCAGTTTTGACTCAACCTCAGACACCATGTGGCCTCATATCTCACAAGTTCCATCGGACCTTGTCTCAGAGTCAAGAAATAGTTCTACCATTGTTAGCAGCTGCTTCCAGCTGGGGACCATTAGGGATACTGAGCCGCCGCTGAACATTAACGCTGCAAGATCAAAGCAACATTTTTACGGTGATCAGCTTAGTTTGGCAGGTTCTTTGAAACAGGAATATCAGTCCCCGCAGACGACTTTTTCTGCAGACTGGCTCTGGAAGAACTCGAGCTCACCCTCTGTTGAGTATAGATCCAATAAAGATTCTAGCTGTAATGCTGATAGTCTGAATCCCTTTCAGTGA 981 0.4924 MNSPPMWTAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPIRKSLELMPPKLLHHPSLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQQQQQQAASQSSSNSASSDVAAAGGSRSVVSGSFQSLTLHGNGAREGFNRGNNVSQLQIQSLPGEINKKEYRFGLNSEVDEHNFLQKGLGSTSYLSFDSTSDTMWPHISQVPSDLVSESRNSSTIVSSCFQLGTIRDTEPPLNINAARSKQHFYGDQLSLAGSLKQEYQSPQTTFSADWLWKNSSSPSVEYRSNKDSSCNADSLNPFQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1578 326 Pfam WRC 75 117 IPR014977 -
Mibi10g1578 326 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi10g1578 326 MobiDBLite consensus disorder prediction 111 142 - -
Mibi10g1578 326 MobiDBLite consensus disorder prediction 306 326 - -
Mibi10g1578 326 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi10g1578 326 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi10g1578 326 PANTHER GROWTH-REGULATING FACTOR 5 13 301 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mibi10g1578 326 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Mibi10g1578 326 MobiDBLite consensus disorder prediction 116 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1578 Mibi-ChrMibi10 36829999 36832927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1578 8 120 GRF Transcription Factor Family AT3G13960 58.974 5.83e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi10g1578 WRC 1.3e-19 No_clan