Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1559 ATGGCAGCTTGCACAATGTACACAAAATGCTACATCTCATCTCCAACAAAATCACATTTGGGTTATTTTCCCCAGAAACAGCAGCTAGTTATCTTCAGTAGTAGTAGAAGAAGAAGCAGCCCATGTGTGATAACATGTGGTGCAGTAGCAGGTGATCATGATCAGACGGTAGTGATTGGTCTAGCTGCAGATTCAGGCTGTGGAAAGAGCACCTTCATGAGAAGATTAACAAGTGTGTTTGGAGGAACAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACTCTCATTAGTGACACAACAACAGTTATTTGCTTAGATGATTATCATTCATTGGACAGAAATGGAAGGACAGAGAAAGAAGTCACAGCACTTGATCCTAGAGCTAATAATTTTGATCTCATGTATGAACAAGTTAAGGCGCTTAAGGATGGAGTTTCTGTGGAGAAACCCATTTATAATCATGTCACTGGTCTCTTGGATCCTCCTGAGCTCATTAAGCCTCCTAAAATCTTGGTCATCGAAGGTTTGCATCCAATGTTTGATCCTCGGGTGAGAGAACTGTTGGACTTCAGTATCTACTTGGACATAAGCAATGAAGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGGCACAGACTTGAAAGCATCAAAGCTAGCATTGAAACTCGGAAGCCTGATTTTGAAGCCTTTATTGATCCTCAGAAACAATATGCAGATGCAGTGATAGAAGTGTTGCCAACACAGCTCGTTCCAGATGATAATGAAGGAAAGATTTTAAGAGTGAGGCTAATACAGAAAGAAGGGGTTAAGCATTTTAGCCCTGCCTACTTGTTTGATGAAGGATCTACCCTTTCCTGGATACCATGTGGGAGGAAGCTAACTTGCTCTTATCCTGGCATTAAATTCTTCTATGGACCAGAGACTTACTACGGTCATGAGGTATCAGTTGTGGAGATGGATGGGAAATTTGACAAATTAGATGAACTGATTTATGTTGAGAGCCATCTCAGTAACCTCTCAACAAAATTCTATGGAGAGATCACACAGCAGATGTTGAAACATGCTGATTTCCCAGGTAGCAACAATGGGACAGGTCTTTTCCAGACCATAATTGGTTTGAAGATTAGATATCTATATGAGCAAATAATAGCCAGCAGGGCTAAGATTCCAGTAGGAGCAGCACAAGCCTAG 1209 0.4169 MAACTMYTKCYISSPTKSHLGYFPQKQQLVIFSSSRRRSSPCVITCGAVAGDHDQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRNGRTEKEVTALDPRANNFDLMYEQVKALKDGVSVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHRLESIKASIETRKPDFEAFIDPQKQYADAVIEVLPTQLVPDDNEGKILRVRLIQKEGVKHFSPAYLFDEGSTLSWIPCGRKLTCSYPGIKFFYGPETYYGHEVSVVEMDGKFDKLDELIYVESHLSNLSTKFYGEITQQMLKHADFPGSNNGTGLFQTIIGLKIRYLYEQIIASRAKIPVGAAQA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1559 402 FunFam Phosphoribulokinase 53 283 - -
Mibi10g1559 402 PANTHER URIDINE KINASE 23 303 - -
Mibi10g1559 402 CDD PRK 58 347 - -
Mibi10g1559 402 Pfam Phosphoribulokinase / Uridine kinase family 58 256 IPR006083 GO:0005524|GO:0016301
Mibi10g1559 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 327 IPR027417 -
Mibi10g1559 402 PRINTS Phosphoribulokinase family signature 207 224 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi10g1559 402 PRINTS Phosphoribulokinase family signature 225 248 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi10g1559 402 PRINTS Phosphoribulokinase family signature 172 190 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi10g1559 402 PRINTS Phosphoribulokinase family signature 63 80 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi10g1559 402 Gene3D - 53 282 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1559 Mibi-ChrMibi10 36620092 36622345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1559 52 248 PRT Gene Family AT1G55810 26.601 6.58e-16 77.4