Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1548 ATGTATCTCTGCCATAATGGATATCATGCTTATCTTAGTGCAGTGAAACCACTAACATTAAAATTAGATGGTCTAGATTTTAGTTTGTCCAGCCAGGAGCAGCCTTCAACCACCAGCTCTGGAACAATAAATCCTGACTGGTCTAGCTTTCAGGCATATTCTCCTATACCTCCACATGGGTACATGGCATCAAATCCCCATGCCCATCCGTATATGTGGGGCGTTCAGCATATGATGCCTCCCTATGGTACTGCACCACATCCCTATATGGCAATGTATCCCCCTGGTGGAATGTATGCCCATCCATCAATGCCTCCGGGATCTTATCCTTTCAGTCCATTTGCCATGCCTGCTTCCAATGGTATTGCTGAGGCTGTGAGTTTTTTCGCCTGCATTCTCTGCTTTCCTCCCTCTTTCTCTCCTGTCTCTACTTCTGCCTCTGGTTTTCCTCTTATGCACAGGACCTGTTTTTTGTTTAATGGGGATAGTGCAAGTAAAGATACCAGTGAAGGAAGTGGTGCAAATTCTCAGGATGACCCTGAGTTCGGATTGGGGGAAAGGCAGGATTCTTTGGAAGTGTATTCTCCACAAAATGGGGGAGTCAATCCACATTATAGAAAGGTTAACCAACCTATGCCTATCTCTGTTGCTGGTGCTCACGGAGCTGTTCCTGGTCCCACAACGAACTTAAATATAGGAATGGATTATTGGGGAGCACCGACATCCACTATTCCCGCGCGACATGGAAAGGTTCCCTCAACTGCAGTTGCTGAGGGGATGGTTACTGGTGGATTACAGGATGAAAGAGAGCTAAAAAGACAGAGGCGGAAGCAATCTAATAGAGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAATGTGAGGAAATAGCCCAGCGGGCTGATGCTATGAAAGAAGAAAATGCTTCCCTCCGTTCAGAACTTAGTCGAATCAAGAGCGAGTGTGAGAAGTTGCTCTCAGAGAATGCTGCACTCAAGAAGAGACTAGGGGAATCACCTGGCAATCGCAGAGATCTTAGGTCTAGCCCGAATGATGAAAATGTGAGTGATGAAGATGAACCTCAACAGACTGGGCAAAAGGAGGATGTGAAGGGTGGTCATTAG 1128 0.4681 MYLCHNGYHAYLSAVKPLTLKLDGLDFSLSSQEQPSTTSSGTINPDWSSFQAYSPIPPHGYMASNPHAHPYMWGVQHMMPPYGTAPHPYMAMYPPGGMYAHPSMPPGSYPFSPFAMPASNGIAEAVSFFACILCFPPSFSPVSTSASGFPLMHRTCFLFNGDSASKDTSEGSGANSQDDPEFGLGERQDSLEVYSPQNGGVNPHYRKVNQPMPISVAGAHGAVPGPTTNLNIGMDYWGAPTSTIPARHGKVPSTAVAEGMVTGGLQDERELKRQRRKQSNRESARRSRLRKQAECEEIAQRADAMKEENASLRSELSRIKSECEKLLSENAALKKRLGESPGNRRDLRSSPNDENVSDEDEPQQTGQKEDVKGGH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1548 375 MobiDBLite consensus disorder prediction 334 375 - -
Mibi10g1548 375 MobiDBLite consensus disorder prediction 165 184 - -
Mibi10g1548 375 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 275 290 IPR004827 GO:0003700|GO:0006355
Mibi10g1548 375 SMART brlzneu 268 332 IPR004827 GO:0003700|GO:0006355
Mibi10g1548 375 Pfam bZIP transcription factor 268 330 IPR004827 GO:0003700|GO:0006355
Mibi10g1548 375 Coils Coil 288 336 - -
Mibi10g1548 375 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 270 333 IPR004827 GO:0003700|GO:0006355
Mibi10g1548 375 SUPERFAMILY Leucine zipper domain 271 327 IPR046347 GO:0003700|GO:0006355
Mibi10g1548 375 Gene3D - 271 326 - -
Mibi10g1548 375 Pfam Disordered region downstream of MFMR 161 244 - -
Mibi10g1548 375 MobiDBLite consensus disorder prediction 269 289 - -
Mibi10g1548 375 PANTHER G-BOX-BINDING FACTOR 3-RELATED 35 365 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mibi10g1548 375 Pfam G-box binding protein MFMR 31 105 IPR012900 -
Mibi10g1548 375 CDD bZIP_plant_GBF1 273 323 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1548 Mibi-ChrMibi10 36530395 36536759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1548 32 337 bZIP Transcription Factor Family AT2G35530 51.289 9.71e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi10g1548 MFMR_assoc 1.9e-19 No_clan