Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1547 ATGGATAAGACTTCAAATGACAAGGAACCTAAGACTCCTGCTGCTACGTCACAGGACCAGCCTTCAACCACTAGCACGGGAGCAATAAATCCTGACTGGCCTAGCTTTCAGGCATATTCTCCTATGCCTCCACATGGATACATGGCATCAAGTCCGCAGGCCCATCCATATATGTGGGGCGTTCAGCCTATTATGCCTCCATATGGTACTCCACCGCATCCTTATGTTGCAATGTATCCCCCTGGCGGCATATATGCTCACCCATCACTGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTAATTCTAATGGGATCGCTGAGGCTTCAGGAAATACACCTGGCAGCACAGAAGGTGATGCTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAGTGAAAAGATCAAAAGGAAGTCTGGGCAATTTGAGTATGATCACAGGGAAGAATAATGAACTTAGTAAAAACCCAGGGACGTCTGGTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCGAGTGAAGATACGAGTGAAGGAAGTGATGGAAATTCTGAAGATGACTCTGAGTTCAAATCAGGAGCTGAACCACTTCAAAATGGAAGTTCAGTGCATGCTCCTCAAAATGGGGGAGTTAATACACATCATAAGATGGTTCATCAAGCTATGCCTATGTCTGCTGCTGGTGTTCCTGGTCCCACAACAAACCTAAATATCGGAATGGATTACTGGGGAGCACCAACTTCTTCTGCAGTTCCTGCAATGCATGGAAAGGTTCCTTCTACTGCAGTTGCTGGGGGAATGGTTACTGCTGGATCACGGGATAGTGTTCAGTCACAACTTTGGCTTCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAACAGTCTAATAGAGAATCAGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAGTGCGATGAACTAGCGCAGCGTGCTGATGCCTTGAAAGAAGAAAATGCTTCTCTCCGGTCAGAAGTGAGTCGGATTAAGAGCGAGTACGAACAGTTGCTTTCAGAGAATGCTGCCCTGAAGGAGAGACTTGGGGAACTTCCTGAGAAAGAAGAATTTAGGTCAGGCCAGAATGATGAAAATGCAAGTAACGAAGCTCAACAGACTGGGCAGGGGGAGGCTGTGAAGGGTGATCAGTAG 1173 0.4697 MDKTSNDKEPKTPAATSQDQPSTTSTGAINPDWPSFQAYSPMPPHGYMASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPSLPPGSYPFSPFAMPNSNGIAEASGNTPGSTEGDAKPPEVKEKLPVKRSKGSLGNLSMITGKNNELSKNPGTSGNGIHSKSGESASEDTSEGSDGNSEDDSEFKSGAEPLQNGSSVHAPQNGGVNTHHKMVHQAMPMSAAGVPGPTTNLNIGMDYWGAPTSSAVPAMHGKVPSTAVAGGMVTAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVSRIKSEYEQLLSENAALKERLGELPEKEEFRSGQNDENASNEAQQTGQGEAVKGDQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1547 390 MobiDBLite consensus disorder prediction 195 210 - -
Mibi10g1547 390 MobiDBLite consensus disorder prediction 106 214 - -
Mibi10g1547 390 SUPERFAMILY Leucine zipper domain 289 345 IPR046347 GO:0003700|GO:0006355
Mibi10g1547 390 Coils Coil 306 354 - -
Mibi10g1547 390 MobiDBLite consensus disorder prediction 1 37 - -
Mibi10g1547 390 Pfam Disordered region downstream of MFMR 130 253 - -
Mibi10g1547 390 CDD bZIP_plant_GBF1 291 341 IPR045314 GO:0003700|GO:0006355
Mibi10g1547 390 MobiDBLite consensus disorder prediction 356 390 - -
Mibi10g1547 390 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 293 308 IPR004827 GO:0003700|GO:0006355
Mibi10g1547 390 MobiDBLite consensus disorder prediction 370 390 - -
Mibi10g1547 390 MobiDBLite consensus disorder prediction 288 312 - -
Mibi10g1547 390 Pfam bZIP transcription factor 286 348 IPR004827 GO:0003700|GO:0006355
Mibi10g1547 390 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 288 351 IPR004827 GO:0003700|GO:0006355
Mibi10g1547 390 MobiDBLite consensus disorder prediction 141 179 - -
Mibi10g1547 390 MobiDBLite consensus disorder prediction 10 33 - -
Mibi10g1547 390 SMART brlzneu 286 350 IPR004827 GO:0003700|GO:0006355
Mibi10g1547 390 Pfam G-box binding protein MFMR 3 91 IPR012900 -
Mibi10g1547 390 Gene3D - 289 343 - -
Mibi10g1547 390 PANTHER G-BOX-BINDING FACTOR 3-RELATED 8 379 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1547 Mibi-ChrMibi10 36525082 36530167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1547 1 384 bZIP Transcription Factor Family AT2G35530 62.814 8.34e-166 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi10g1547 MFMR_assoc 2.5e-40 No_clan