Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1536 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCTTTGCAGATTAGTCCTCCAAACACAAAACCCACATCAGGATGGAGAAATCAAGATCATCATCATCATCAGCTTGATTTGGGGTTTTGGAAGAGAGCTTTGGAAACCAGAAGCTCATTGCTTTCTTCAATGCCTAAAACCACTGACACTACAACAGCTAGCACTACTAATACTACAACTCCCTTTTTTGATCTTTCACTCTCCAACCATAACAATCACCCAAACCCTTCAATTATTTCTTCTTCCTCAGTTCATCATCATCCTCATCTCAGCCACCACCACCACCGCTTTCACCAAAACGCTCCGTTTCAAAATCCACCTCACTTGACACAAGACCTCGGATTTCTCAGACCCATAAGAGGAATTCCTGTCTACCAAAACCATATTCCTCATCCTCATCCAGCAAATCCTCTTCCTTTCTCTCAAGTACAGAATCTGGAAGCTTCTATTAACAACAACAATACCACCACCACCTGCACAACCTCTACAGCCCCTTTTCCTTATAATCATCAAAATAATCATAATAGTCATAGTCATGGTCAAGGTTTGATGAGGTCGAGGTTCTTGTCTCATCGTTTTCCAACCAAACGAAGCATGAGAGCTCCCAGGATGCGTTGGACTACCACCCTCCATGCTCGTTTTGTTCATGCCGTTGAGCTTTTGGGTGGCCATGAAAGGGCTACACCCAAATCTGTTCTTGAGCTCATGGATGTCAAGGATCTTACCTTAGCCCATGTTAAATCCCACTTACAGATGTATCGGACGGTGAAAACCACTGATAGAGCTGCAGCTTCTTCTACAGGCCAATCAGACGGATACGATAATGGATCATCCGGGGATACCTCTGAAGAATTAATGTTTGACATGAACAATCTTACAAGTCCTAAGCAGGGAAGACAAAGTGTTCATCAAGACAAGGAATACCATAGCCTTTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGGAAGCCAAAGGAGACTGATTCTGTTGGAAACAACAATGTTAGTACCCTTGAGAAAGAGAGAGTATCAGATGGAAGCTCATCGTCAAACATTTCAGGATCAAGCCCTAGGAAGCCTAATCTTGATTTGGAGTTCAGTTTGGGACAGCCAATATGA 1152 0.4358 MELFPAQPDLSLQISPPNTKPTSGWRNQDHHHHQLDLGFWKRALETRSSLLSSMPKTTDTTTASTTNTTTPFFDLSLSNHNNHPNPSIISSSSVHHHPHLSHHHHRFHQNAPFQNPPHLTQDLGFLRPIRGIPVYQNHIPHPHPANPLPFSQVQNLEASINNNNTTTTCTTSTAPFPYNHQNNHNSHSHGQGLMRSRFLSHRFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSTGQSDGYDNGSSGDTSEELMFDMNNLTSPKQGRQSVHQDKEYHSLWSNSSREAWLHGKPKETDSVGNNNVSTLEKERVSDGSSSSNISGSSPRKPNLDLEFSLGQPI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1536 383 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
Mibi10g1536 383 Gene3D - 211 268 - -
Mibi10g1536 383 MobiDBLite consensus disorder prediction 332 383 - -
Mibi10g1536 383 MobiDBLite consensus disorder prediction 1 30 - -
Mibi10g1536 383 MobiDBLite consensus disorder prediction 269 294 - -
Mibi10g1536 383 MobiDBLite consensus disorder prediction 338 371 - -
Mibi10g1536 383 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 382 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mibi10g1536 383 SUPERFAMILY Homeodomain-like 209 265 IPR009057 -
Mibi10g1536 383 FunFam Myb family transcription factor 210 268 - -
Mibi10g1536 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 212 265 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1536 Mibi-ChrMibi10 36408623 36412776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1536 67 382 G2-like Transcription Factor Family AT5G16560 40.833 1.99e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi10g1536 Myb_DNA-binding 1.8e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g1536 10 36408623 36412776 Mibi10g1536 10 36408623 36412776 ECH