Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1534 ATGCCATTGGTTCATTCCGTGCCACGTGTGTCGCAGTTCATTTTCATTTCCAAAGTGACTTCCATGCGTGTTCCACATGTGACCATATCCTCTAATGACAGAAAAGCCCTTGCTTCTTCCAACGACTATACGAAAAGGCAGGAGGCTAAAAGGGAAGGCTTTGGATCTCTCTATGTTCTTGTTTCAGCCTCGTGCTCCGCTTTCCGCGAGAATGTGGCGACTCTGGTTGCTCTTGAAGGCTCGCTTTTAATCTGTAAATTCCAGGATCGTGATCTAGGGTTTGGCTCTCGGATTTTGATTCAGTTTTGTTGTTGTTTTTGTGATTTCTTGTCCGAGTGGACGAAGACTGAGGCTTACAGGGAGCTACCTCGGGATGAAATGGTGGAAGGAAGAGTTTGTTTGCCCAAGGGAGCTAGAAAAATATTAGAATCTTTGAAGCGTGAAAGGCTTCACCAAGCAAAATCAACTGCTAACAAGATAAGTGTTGCTAATATGATGACAAGAAGCGGAGGAGATGCTTTAAGGGCTTCGTCATCATGTGGTTTGAGATTGCATGGTAATGCAGATGCATTTTCCAAGCGGAAGGTGGATAAGTTTGACATGAGTGATCTAGAATGGACTGAGAAAATCCCCGAGTGTCCTGTATACTCCCCAACAAAAGAGGAATTTGAAGACCCTTTGGTTTATCTGCAAAAGATAATTCCTGTGGCTTCAAGATATGGTATATGCAAGATTATTTCTCCTTTGAGTGCTTCAGTTCCTGCTGGAACTGTGTTAATGAAGGAGAAAGCAGGATTTAAATTTGCAACTAGAGTACAGCCACTTCGCCTTGCTGAGTGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGAAATTATACATTTCGCGATTTTGAAAAAATGGCGAACAAGATGGAAACTGTAGAATATGCATGTGATGTAGATGGTAGTGCCTTTTCCTCTTATCCCAATGATCAACTTGGGAGCAGCAAATGGAATTTGAAGAAGCTTTCTCAGCTGCACAAATCCATTTTGCGGCTCTTGGAAACAGTAATTCCGGGAGTAACAGAGCCCATGCTATACATTGGAATGCTGTTTAGTATGTTTGCTTGGCATGTGGAGGATCACTATTTGTACAGTATTAATTATCATCACTGTGGGGCATCAAAAACTTGGTATGGAATTCCAGGTCATGCAGCTTTGGAATTTGAAAAGGTGGTAAGAGAACATGTGTATACTAATAATATTCTGTCAAGTGAAGGGGAAGATGGAGCCTTTGATGTTCTTCTGGGGAAAACAACTCTGTTTCCTCCAAATATTTTGTTGGAACATGAAGTGCCGGTCTACAAAGCTGTTCAAAAACCAGGAGAGTTTATTGTTACCTTTCCTAGAGCGTATCATGCTGGTTTTAGTCATGGCTTTAACTGTGGAGAAGCAGTGAATTTTGCCATTGGTGATTGGTTTCCATTGGGGGCCATTGCCAGCAGGCGATATGCACATCTAAACAGGGTTCCACTGCTACCTCACGAAGAACTTTTATGCAAAGAAGCAATGCTCCTTTATACAAGTTTAGAACTTGAAGATTCAGATTTATCTTCTGCAGATTCCATGTTTCATAATAGCATTAAGACCTCTTTCGCTAATTTGATGCGCTTCCAGCATTGTGCTTGCTGGTCCTTACTTAAATCGGGGGCGTGCACAAATGTTTCTTCACACTCCCATGGTTCAATTCTCTGTAGTCTCTGCAAACGTGACTGCTATGTAGCGTATGTTGACTGTGACTGTCACATGCATCCAGTCTGTGTTCGCCATGATATCAAATCTCTTGATTTCACCTGTGGGAGCAAGCGCACTCTTTACTTGAGGGAGGATATTGAGGATATGGAAGCTGCGGCTAAGAGGTTTGAGCAGGAAGATGGTATATTGGATGAGATAATTAAGCAGATCAAGGCTGACAATAACATGTATTCATATCCATTGTCAAACATGTTTCAGAGAGCTGAGGCTGATGGATATACCCCTTATTGCGAGATAAAACTTGATCCTGTTATTGAATCTTCTTACTCAGGCTCAGATCAGTTAATGAATATTCAAGATTGTGCTATTCAAGGTCAATGGACTTCAAGGCACTGTTCAGGATCAGAGCATCAAAAATCCGAAGTGTCTGATGTTTCCCTCGTTTCTGCTTCTTCTGCTCTGTGCTCTATTTCAGACGCTTTTGAGAGTTATTCTTCTAATACTAAAAAACATGAGGGGCGTGGAATTTCTGGCATTGTTAATTCTGAAGAGCTTTGTGAAGGAGTGGCCGACAGAGTATGCGAATCTTTAGCATCCCCTACACGGAATCATGACCGCACGATTAAACCTCAAGGAGGTGATCTTTATCGATTAGAGATGAAATCCATGGTGAATAATGACAGTGATGATTCTGATTCAGAGATATTTAGGGTAAAGCGGCCTTCTTCTTTGAAGGCAGAGAGGAGAAATGGGAATGATGGGATGTGTTCCAAACACTCTGAGCACCAGGGACTAAAACGATTGAAGAAAAACTCTGATGAAGGAAGAAGTGGGCAAGTGATAGAGGACAGCAAGTGGAGGCGCTTAACAAATCACAAAATTGATGGCGAGAGTTGTACGAGGAAAAGATATGGCAAGGTTAATAACGGCATCCCCATTTCGATAAGGTACAAGAAACTAGGAACATATGAGGAGTTAAGTGGACAGGGAGATCACCACAAGAGAAATTGGTTGCAACAGAGTATATTGGAAGCATCATCATCTCCAACAAATCCAACAGAAATTGGGATTGGAGCAAAGCGGCTAAAAGTGCGAGGCCCTTCATTCCTGAGCTTATAA 2862 0.4207 MPLVHSVPRVSQFIFISKVTSMRVPHVTISSNDRKALASSNDYTKRQEAKREGFGSLYVLVSASCSAFRENVATLVALEGSLLICKFQDRDLGFGSRILIQFCCCFCDFLSEWTKTEAYRELPRDEMVEGRVCLPKGARKILESLKRERLHQAKSTANKISVANMMTRSGGDALRASSSCGLRLHGNADAFSKRKVDKFDMSDLEWTEKIPECPVYSPTKEEFEDPLVYLQKIIPVASRYGICKIISPLSASVPAGTVLMKEKAGFKFATRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKMETVEYACDVDGSAFSSYPNDQLGSSKWNLKKLSQLHKSILRLLETVIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALEFEKVVREHVYTNNILSSEGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFIVTFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYAHLNRVPLLPHEELLCKEAMLLYTSLELEDSDLSSADSMFHNSIKTSFANLMRFQHCACWSLLKSGACTNVSSHSHGSILCSLCKRDCYVAYVDCDCHMHPVCVRHDIKSLDFTCGSKRTLYLREDIEDMEAAAKRFEQEDGILDEIIKQIKADNNMYSYPLSNMFQRAEADGYTPYCEIKLDPVIESSYSGSDQLMNIQDCAIQGQWTSRHCSGSEHQKSEVSDVSLVSASSALCSISDAFESYSSNTKKHEGRGISGIVNSEELCEGVADRVCESLASPTRNHDRTIKPQGGDLYRLEMKSMVNNDSDDSDSEIFRVKRPSSLKAERRNGNDGMCSKHSEHQGLKRLKKNSDEGRSGQVIEDSKWRRLTNHKIDGESCTRKRYGKVNNGIPISIRYKKLGTYEELSGQGDHHKRNWLQQSILEASSSPTNPTEIGIGAKRLKVRGPSFLSL 953
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1534 953 Gene3D Cupin 196 307 - -
Mibi10g1534 953 SMART cupin_9 328 501 IPR003347 -
Mibi10g1534 953 MobiDBLite consensus disorder prediction 825 860 - -
Mibi10g1534 953 Pfam JmjC domain, hydroxylase 361 484 IPR003347 -
Mibi10g1534 953 Gene3D Cupin 308 506 - -
Mibi10g1534 953 Pfam C5HC2 zinc finger 581 632 IPR004198 -
Mibi10g1534 953 PANTHER LYSINE-SPECIFIC DEMETHYLASE 205 873 - -
Mibi10g1534 953 Pfam jmjN domain 214 246 IPR003349 -
Mibi10g1534 953 ProSiteProfiles JmjC domain profile. 328 501 IPR003347 -
Mibi10g1534 953 ProSiteProfiles JmjN domain profile. 213 254 IPR003349 -
Mibi10g1534 953 SUPERFAMILY Clavaminate synthase-like 290 517 - -
Mibi10g1534 953 SMART JmjN_1 212 253 IPR003349 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi10g1534 Mibi-ChrMibi10 36380606 36389011 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1534 210 651 JUMONJI Transcription Factor Family AT2G34880 30.403 1.15e-58 214
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi10g1534 JmjC 2.2e-39 CL0029