Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1530 ATGAGCTTTCAGGATATCGAAGCTGGCCGGCCTTTCTCTTCCCGGAGAAACCTCGGAAATCCCAATCAAGATCCTACCCAGGCCGTCGCTTCCGGTATCTTTCAGATCAACACCGCTGTTTCCACCTTTCATAGGCTCGTCAATACCCTTGGAACCCCCAAAGATACGCTTGAGCTGCGTGAGAAATTGCACAAGACAAGACTACAAATTGGGCAATTGGTGAAGGATACATCTGCCAAACTCAAGCAGGCTAGTGAAATAGATCACCATGTTGAAGTTAGCGCTAGTAAGAAGATAGCAGATGCTAAACTTGCGAAAGATTTTCAGGCAGTTTTGAAAGAATTTCAGAAGGCACAGCAGCTTGCAGCCACAAGGGAAACTGCCTACACTCCTTTCGTTTCACAAGCAAGTCTTCCGTCCAGTTATATGGCCAGTGAGGCAGATGCTAGTTCTGATTATAAGGATTCAGAACAGCGTGCTCTTCTTGTGGAACCCAGAAGGCAGGAAGTGTTATTTTTGGATAATGAGATTTCCTTCAATGAAGCTATAATTGAGGAACGTGACCATGGCATTCAAGAAATCCAACAGCAAATCGGTGAAGTAAATGAGATTTTTAAAGATCTTGCTGTGCTTGTACATGAGCAAGGAGCCATGATTGATGATATTGGATCCAACATTGAGGCCTCCCATGCGGCAACTTCAGAAGGAAAATCTCAACTTGTGAAAGCCGCAAAGACCCAAAGATCAAATTCGTCTCTGACTTGCTTGCTTTTGGTGATATTTGGGATCGTGCTCCTCATCGTGATCATAGTTCTTGCCGCCTAA 825 0.4473 MSFQDIEAGRPFSSRRNLGNPNQDPTQAVASGIFQINTAVSTFHRLVNTLGTPKDTLELREKLHKTRLQIGQLVKDTSAKLKQASEIDHHVEVSASKKIADAKLAKDFQAVLKEFQKAQQLAATRETAYTPFVSQASLPSSYMASEADASSDYKDSEQRALLVEPRRQEVLFLDNEISFNEAIIEERDHGIQEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEASHAATSEGKSQLVKAAKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1530 274 Gene3D - 19 135 - -
Mibi10g1530 274 FunFam Syntaxin-22 like 174 274 - -
Mibi10g1530 274 Pfam Syntaxin-like protein 30 129 IPR006011 GO:0016020
Mibi10g1530 274 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mibi10g1530 274 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Mibi10g1530 274 CDD SNARE_Qa 184 242 - -
Mibi10g1530 274 Pfam SNARE domain 218 269 IPR000727 -
Mibi10g1530 274 FunFam Syntaxin-22 like 20 133 - -
Mibi10g1530 274 Gene3D - 175 274 - -
Mibi10g1530 274 PANTHER SYNTAXIN 26 266 IPR045242 -
Mibi10g1530 274 SMART SynN_4 13 127 IPR006011 GO:0016020
Mibi10g1530 274 SUPERFAMILY t-snare proteins 23 236 IPR010989 GO:0016020|GO:0016192
Mibi10g1530 274 SMART tSNARE_6 176 243 IPR000727 -
Mibi10g1530 274 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1530 Mibi-ChrMibi10 36296835 36299925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1530 1 262 SNARE and Associated Proteins AT5G46860 75.954 1.00e-138 390