Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1527 ATGACATTGGTAAGAGAGAGGAGGCACCAGCAAGCTCTAAGGCTTTCCTTGCCGTTACCTTCAATTCCAGAATTAGACTTCTTCTGCCATCAAACCCAAATCCCAGCCTCCTTTAGCGACACTCTATCCACCAAGAACCTTTTGAGCCTGGAGAAACTCACAGTTCTAGGCCATGGCAATGGTGGTACAGTGTACAAAGTCCATCACAAGAAGAATCAGACCTTGTATGCTTTGAAAGTCCTCAGGTTCAACCAGAATGCTCTTGAAATCTCTCAGCAGGCTAAACGTGAGGCAGAGATTCTTAGGAGAGTGGATTCCCCATATATTGTCAAGTGCCATGCAATTTTTGACAATACTTGTAGCAGTGAATCTCATGTAAATGGAGGAGGTAGTGGCATTAGCTTTGTTATGGAATACATGGAAAGAGGTTCATTACAGGATGTATTGAGAGAACACAAGGCACTACCAGAGGAAGTGATATGTGTCTTGGCAAGGAGGATTTTGGAAGGACTCAAGTATTTGCATGGAATGAACATAGTGCACAGAGATATCAAACCTTCAAACTTGCTTGTGAATGACAAAGGGGAGGTGAAGATTGCAGATTTTGGAGTGAGTCATGTGGTAGAATTAGGAAGGTTTGGTGAATCAGATTGTAATGCAGGAACTTGTGCTTATATGAGCCCAGAAAGAGTTGATCCAGAGAGATGGGATGGTGAAAATGCAGATGGGTTTGCTGGGGATGTTTGGTCAGTGGGAGTTTTGATGCTAGAATGTCTTATGGGTCATTTCCCTTTTACTGATGCAGGCCAAAAACCAGACTTTGTTACATTGATGTGTGTGATTTGTTCTGGTGAGAAGCTTGAAATGCCAGAGAAGGCATCACCTGAATTCAAAAGTTTGGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGGGCAACAGTTAGTGAGCTTCTTGATCACCCTTTTGTGAATAGCAAGTCTTGCCTTTCTAGAAGCAAAGAGTTGCTCAATCATCTTCTGCATTGTTGA 1032 0.4273 MTLVRERRHQQALRLSLPLPSIPELDFFCHQTQIPASFSDTLSTKNLLSLEKLTVLGHGNGGTVYKVHHKKNQTLYALKVLRFNQNALEISQQAKREAEILRRVDSPYIVKCHAIFDNTCSSESHVNGGGSGISFVMEYMERGSLQDVLREHKALPEEVICVLARRILEGLKYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVELGRFGESDCNAGTCAYMSPERVDPERWDGENADGFAGDVWSVGVLMLECLMGHFPFTDAGQKPDFVTLMCVICSGEKLEMPEKASPEFKSLVQRCLEKDWRKRATVSELLDHPFVNSKSCLSRSKELLNHLLHC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1527 343 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 46 327 - -
Mibi10g1527 343 Gene3D Phosphorylase Kinase; domain 1 30 136 - -
Mibi10g1527 343 SUPERFAMILY Protein kinase-like (PK-like) 51 326 IPR011009 -
Mibi10g1527 343 CDD PKc_MAPKK_plant_like 49 325 - -
Mibi10g1527 343 ProSiteProfiles Protein kinase domain profile. 50 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1527 343 Pfam Protein kinase domain 51 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1527 343 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Mibi10g1527 343 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Mibi10g1527 343 PRINTS Tyrosine kinase catalytic domain signature 246 268 IPR001245 GO:0004672|GO:0006468
Mibi10g1527 343 PRINTS Tyrosine kinase catalytic domain signature 137 150 IPR001245 GO:0004672|GO:0006468
Mibi10g1527 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Mibi10g1527 343 Gene3D Transferase(Phosphotransferase) domain 1 137 340 - -
Mibi10g1527 343 SMART serkin_6 50 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1527 Mibi-ChrMibi10 36288097 36289128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1527 1 327 MAP Kinase Kinase Gene Family AT1G32320 51.682 1.14e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mibi10g1527 Pkinase 3.4e-64 CL0016