Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1526 ATGGACGGAGTTAATAACGGCGGCGGCGCCGCCCAGACGCCGGCTCCGGCTCCGGCACCGATTCCCAATACAAACGGGCCTCCGCCGTTTCTGAGTAAGACATATGACATGGTGGATGACCCTTCTAGTGATGCGATTGTTTCTTGGAGTTCAACCAATAACAGCTTTGTGGTTTGGAACCCTCCTGAATTTGCCAGGGACCTTTTGCCTAAGTACTTTAAGCACAATAACTTCTCCAGCTTTGTTAGGCAGTTGAACACATATGGTTTTAGGAAGGTCGATCCAGATCGGTGGGAATTTGCTAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGTATAACCCGACGAAAACCTGCCCATGGTCATAGTCATCAACAGGCACAACAATCTCATGGGCAGAGTTCATCTGTAGGGCCATGTGTTGAGGTTGGGAAGTTTGGTCTAGAGGAGGAGGTTGAAAGGCTCAAAAGAGATAAGAATGTGCTCATGCAGGAGCTAGTGAGGTTGAGACAGCAGCAACAGGCCACTGATAACCAGATGCAACAAATGGTTCAGCGCATGCAGGGAATGGAACAACGTCAGCAGCAAATGATGTCATTCCTGGCAAAGGCTGTCCAGAGCCCTGGCTTCTTGACTCAGTTTGTACAACAACAAAATGATAGCAATAGGCGCATAACTGAAGCCAACAAAAAACGGCGGCTTAAGCAGGAAGGTATTGCTGAAACAGAGAGCGCTACTGCTTCTGATGGGCAAATTGTTAAGTATCAACCTTTGATGAATGAAGCTGCTAAAGCAATGCTAAGGCAGATCATGAAATTGGATACCCCTTGGCTAGAATCTTTCAATAATAACTCAGACAATTACTTGATTGGTGATGGCTTAGCATCATCAGGGGCAATGAACAATGGCAGCACTTCAAACCGGAGCTGTGGAGTAACCCTTCAAGAGGTCCCCCCAACTTCAGTGAATGCTCCCTCAGCTAGCAAATCTGAAATGCAATCTTCTCCATTGTCTGTAGCTTCTGAAAAAGTTACAACTGCTGAATACCCTGATGTAAATGTGTTGGCTGGTGCTTCTGAGAAACCTACTATCCCTGTTTCTGAGGCAGATGTCTTGCCTGAGCTTCCTCAGATACCAGAGATGGCGACAGGAAGTATCCTTGATATTCCTGAAGATGATGGATTCATGGATGCTAACTTATTGGGGGTAGATGGGTCGATGCCCATTGATATTGGTAGTATACCTGATGCAGACATCGATGAATTGTTACGCAATGCTTCTTTTTGGGAGGACCTTGTGCAAAGTCCACTGCCTGATGATGTCGAGATTGATACTACTGATGCGTCCAATGGAAATGAGGTGCAGCCAGTGGAAAATGGATGGGACAAAGCAGAACATATGGATCAACTTACAGAGCAGATGGGTCTTCTATCTTCTGATGCAAAAAGAGTTTGA 1464 0.4617 MDGVNNGGGAAQTPAPAPAPIPNTNGPPPFLSKTYDMVDDPSSDAIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSHQQAQQSHGQSSSVGPCVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQMQQMVQRMQGMEQRQQQMMSFLAKAVQSPGFLTQFVQQQNDSNRRITEANKKRRLKQEGIAETESATASDGQIVKYQPLMNEAAKAMLRQIMKLDTPWLESFNNNSDNYLIGDGLASSGAMNNGSTSNRSCGVTLQEVPPTSVNAPSASKSEMQSSPLSVASEKVTTAEYPDVNVLAGASEKPTIPVSEADVLPELPQIPEMATGSILDIPEDDGFMDANLLGVDGSMPIDIGSIPDADIDELLRNASFWEDLVQSPLPDDVEIDTTDASNGNEVQPVENGWDKAEHMDQLTEQMGLLSSDAKRV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1526 487 Pfam HSF-type DNA-binding 30 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g1526 487 MobiDBLite consensus disorder prediction 118 140 - -
Mibi10g1526 487 SUPERFAMILY "Winged helix" DNA-binding domain 25 119 IPR036390 -
Mibi10g1526 487 Coils Coil 148 189 - -
Mibi10g1526 487 SMART hsfneu3 26 119 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g1526 487 FunFam Heat shock transcription factor 1 23 120 - -
Mibi10g1526 487 PRINTS Heat shock factor (HSF) domain signature 30 53 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g1526 487 PRINTS Heat shock factor (HSF) domain signature 68 80 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g1526 487 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi10g1526 487 Gene3D - 23 120 IPR036388 -
Mibi10g1526 487 MobiDBLite consensus disorder prediction 126 140 - -
Mibi10g1526 487 MobiDBLite consensus disorder prediction 304 342 - -
Mibi10g1526 487 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 329 IPR027725 -
Mibi10g1526 487 MobiDBLite consensus disorder prediction 1 31 - -
Mibi10g1526 487 ProSitePatterns HSF-type DNA-binding domain signature. 69 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1526 Mibi-ChrMibi10 36274665 36285441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1526 4 481 HSF AT1G32330 53.953 6.57e-172 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi10g1526 HSF_DNA-bind 3.9e-33 CL0123