Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1506 ATGGACGCATTCATCGGCTCCGATCTCTCTTCTCTCTGGCCTCCTCAACAATCCTCTGCTTCCACAACCACCGGAACCGAACCTTCCAAAGCCTTCTCTCAAAACCACCTCTCCCTCTGCATCTTCAACCAAGAATCTCTCCAACAACGCCTCCAAGCTCTAATTGAAAAATCCAGCGAAAGCTGGACCTACGCAATTTTCTGGCAATCCTCCTGTGACTACTCAGGATCCTCCGTATTAGGCTGGGGAGATGGATACTACAAAGGCGAAGACGTTAAAGGAAAAGGAAAAGCCAAAACGACGTCGTCATCCGAACAAGAGCACCGGAAGAAGGTACTTCGTGAGCTTAATTCGTTAATCTCCGGTTCAACCGCTTCACCAGACGACGCCGTAGATGAAGAAGTCACAGATACAGAGTGGTTCTTTCTTGTTTCGATGACTCAGTCGTTTTACAACGGCGGCGGTTTACCGGGCCAGGCGTTTATGAATTCGAGCCCGGTTTGGGTGACCGGTTCGGACCGGCTTGCGAATTCGGCTTGCGAGAGGGCGAGGCAGGGTCAGGTGTTTGGGATTCAGACTCTGGTTTGTATACCATCGGCGAGTGGTGTCGTTGAATTAGGGTCTACTGAGTTGATTTTTCAGAACTCGGATTTGATGAATAAGGTTAGGGATTTGTTCAACTTCAATGGTGCTGAAGGGAGTAGTTCTATTTGGCCGTCTTCGAATGCTTCAACTGAGAACGATCCTTCTTCTCTCTGGCTTAACGATAATCCTTCTGGAATTGAAATTAGGGATTCTGTGACCACTGTCGTGCCCAATAATTCGAAGCCGGTGATATTAGATACAAGAGGTTCAACGAGTTTAGCTGAGACGCCGAGTTCTGTTCATGTACCAAATGTTCAACGGCAAGGGAATTCGCTGAATCGGGGTTTCTATTCACGGGAATTGAATTTTTCGGAGTATGGATTGGAAGGGAATGGTGTGAAGAACGGGAATTCGCATTCGTTGAAGCCGGAATCGAGTGAGGTTATGAGTTTTGGGGAGAGTAAGAGGGACGGTTATAATGGAAATGGGAAAATTGTTTCAGGTCAATCTCAGTTTAATGGTGAGGAGAAGAAGAGGAGGTCGCCTACTTCTAGGGGTAGCAATGATGAAGGCATGCTTTCTTTCACTTCAGGTGTGGTTTTGCCTGCTTCAAATATGAAGACTGGTGGTGGTGGTGATTCTGATCATTCTGATCTTGAAGCTTCTGTGATTAAGGAGGTAGATAGTAAAGTTGTTGAGCCAGAGAAAAAACCGAGGAAAAGAGGACGAAAGCCTGCAAATGGAAGAGAGGAGCCTCTGAATCATGTTGAAGCTGAAAGGCAGAGGAGGGAGAAGTTAAACCAACGATTCTATGCGCTTCGTGCTGTGGTTCCTAACGTTTCAAAGATGGATAAAGCATCCCTTCTGGGTGATGCCATATCTTACATCACTGACCTCAAGTCCAAGCTTCAGACAATGGAAACAGACAAGAACGAATTGCAGAGCCAGTTGGATTCAGTGAGGAAGGAGCTTGAGCTAGCCCACAAAGATTCAGCACCACCTCCAACGGAGAAAGAACCAAAGGCGTCCAATAACCAAGGTGGCAGGATTGCAGATTTGGATATCGACGTGAAGATTATAGGCTGGGATGCGATGATTAGGATTCAATGTAGCAGGAAGAACCACCCAGCAGCAAGGTTGATGGCGGCATTGAAGGAGCTAGACTTGGATGTGAACCATGCGAGTGTGTCGGTGATGAATGATTTGATGATCCAACAAGCAACAGTGAGGATGGGGAGTCAATTCTACACGCAGGAGCAACTCCGGTTAGCACTTTCGTCCAAAGTTGGCGATGTCCGATAG 1887 0.4716 MDAFIGSDLSSLWPPQQSSASTTTGTEPSKAFSQNHLSLCIFNQESLQQRLQALIEKSSESWTYAIFWQSSCDYSGSSVLGWGDGYYKGEDVKGKGKAKTTSSSEQEHRKKVLRELNSLISGSTASPDDAVDEEVTDTEWFFLVSMTQSFYNGGGLPGQAFMNSSPVWVTGSDRLANSACERARQGQVFGIQTLVCIPSASGVVELGSTELIFQNSDLMNKVRDLFNFNGAEGSSSIWPSSNASTENDPSSLWLNDNPSGIEIRDSVTTVVPNNSKPVILDTRGSTSLAETPSSVHVPNVQRQGNSLNRGFYSRELNFSEYGLEGNGVKNGNSHSLKPESSEVMSFGESKRDGYNGNGKIVSGQSQFNGEEKKRRSPTSRGSNDEGMLSFTSGVVLPASNMKTGGGGDSDHSDLEASVIKEVDSKVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITDLKSKLQTMETDKNELQSQLDSVRKELELAHKDSAPPPTEKEPKASNNQGGRIADLDIDVKIIGWDAMIRIQCSRKNHPAARLMAALKELDLDVNHASVSVMNDLMIQQATVRMGSQFYTQEQLRLALSSKVGDVR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1506 628 MobiDBLite consensus disorder prediction 10 30 - -
Mibi10g1506 628 MobiDBLite consensus disorder prediction 1 30 - -
Mibi10g1506 628 Gene3D - 437 526 IPR036638 GO:0046983
Mibi10g1506 628 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 47 226 IPR025610 -
Mibi10g1506 628 MobiDBLite consensus disorder prediction 329 389 - -
Mibi10g1506 628 PANTHER MYC 33 623 IPR045084 GO:0003700|GO:0006355
Mibi10g1506 628 CDD bHLH_AtAIB_like 442 518 - -
Mibi10g1506 628 Coils Coil 491 525 - -
Mibi10g1506 628 MobiDBLite consensus disorder prediction 522 543 - -
Mibi10g1506 628 MobiDBLite consensus disorder prediction 418 455 - -
Mibi10g1506 628 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 448 515 IPR036638 GO:0046983
Mibi10g1506 628 FunFam Transcription factor bHLH13 438 512 - -
Mibi10g1506 628 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 445 494 IPR011598 GO:0046983
Mibi10g1506 628 SMART finulus 451 500 IPR011598 GO:0046983
Mibi10g1506 628 Pfam Helix-loop-helix DNA-binding domain 449 494 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1506 Mibi-ChrMibi10 35952374 35954260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1506 1 625 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 53.882 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi10g1506 bHLH-MYC_N 7e-57 CL0161