Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1495 ATGTCACCACCAGTTCTGATTGCTCAGGAGGAAGGGCTGAGCAACACCTCAACAATAACTTCCTCACGATCCTCGGATCTTATCTCCCAAAATGTGACTGGATTAAAAGAACGCAATTACCTAGGTTTATCAGATTGTTCATCAGTGGACAGCTCTACTGTTCCAAGCGACTCAGATGAGAAAAAGGACGATCTGAATTTGAAGGCTACAGAATTGAGGTTGGGCCTTCCTGGATCCCAATCACCTGAAAGGGATGATAGCTCAACAAAACTAGATGAGAAGCCACTCTTTCCTTTGCTTCCTACAAAAGATGGAATCTGCTCATTGTCCCAGAAAACTGTGATTACAGGCAACAAAAGGGGATTCTCTGACACCATGGATGGGTTCCCTGAGGGTAAGTTTCCCGGGAATTCAGGGGTAAATGTGCTGCTGTCTCCTAGATCTGCTAGAGCTCAGCCAACCACACCAAAAGAAATGCCAACTAAGGCGCTGCAAGAACGGCCATGTGCAACTAGTGGAACAGGCCATAACAAAACGGATGCTTCTATTGGTGGCAGTGCTCCTGCCTCTAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTAGGAAGAACTCGTTGGCTGTCACTTCAAAGAACAATGATGAAGTAGATGGTAAACCAAGTCCTGCTGCTCTCTTTGTGAAGGTGAGCATGGATGGAGCTCCCTATCTAAGGAAGGTTGACCTTAGAAGTTACGGCACATACCAGGATCTGTCTTCTGCCCTTGAGAAGATGTTCAGCTGTTTTACCCTAGGTCAATGTGGAGCCCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTAAGGGACCTTCTGCATGGTTCAGAATATGTACTCACTTACGAAGATAAAGATGGTGATTGGATGCTTGTTGGGGACGTGCCATGGGAGATGTTTATTGACACTTGTAAGAGGCTGAAAATCATGAAAGGTTCTGATGCTATTGGCTTAGCTCCTAGGGCTATGGAGAAATCCAAGAGCAGGAGCTAG 1041 0.4621 MSPPVLIAQEEGLSNTSTITSSRSSDLISQNVTGLKERNYLGLSDCSSVDSSTVPSDSDEKKDDLNLKATELRLGLPGSQSPERDDSSTKLDEKPLFPLLPTKDGICSLSQKTVITGNKRGFSDTMDGFPEGKFPGNSGVNVLLSPRSARAQPTTPKEMPTKALQERPCATSGTGHNKTDASIGGSAPASKAQVVGWPPIRSFRKNSLAVTSKNNDEVDGKPSPAALFVKVSMDGAPYLRKVDLRSYGTYQDLSSALEKMFSCFTLGQCGAHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1495 346 FunFam Auxin-responsive protein 221 338 - -
Mibi10g1495 346 ProSiteProfiles PB1 domain profile. 226 330 IPR000270 GO:0005515
Mibi10g1495 346 MobiDBLite consensus disorder prediction 9 27 - -
Mibi10g1495 346 MobiDBLite consensus disorder prediction 167 186 - -
Mibi10g1495 346 MobiDBLite consensus disorder prediction 72 97 - -
Mibi10g1495 346 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 333 IPR003311 GO:0005634|GO:0006355
Mibi10g1495 346 Pfam AUX/IAA family 70 337 IPR033389 -
Mibi10g1495 346 MobiDBLite consensus disorder prediction 1 27 - -
Mibi10g1495 346 SUPERFAMILY CAD & PB1 domains 223 327 - -
Mibi10g1495 346 Gene3D - 222 340 - -
Mibi10g1495 346 MobiDBLite consensus disorder prediction 151 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1495 Mibi-ChrMibi10 35841361 35844117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1495 230 336 B3 DNA Binding Superfamily AT4G23980 28.972 2.63e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi10g1495 AUX_IAA 3.3e-89 CL0072