Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1476 ATGGCATCCTCAAACTCTGTGTTCTTAATGTTGATCTTCATGTTGCTCTTGTCATCACTCCCAGAAACTGTACACTCTGTTTTCTTTAACTTCACCAAATTCCAACCCAACATGAACAATCTAATACAATTCCAAGGTGATGCCTTTTCATCAGATGATGTTCTTCAGCTCACAAAGAACCGACTTGATGGCCCTATCACAAGCAGTGTTGGTCGAGCCACTTATGCTGAACCGGTTCGTGTTTGGGACAAAAAAACCGGGAAGCTCACGGATTTCAATACCCATTTCACCTTTATTATGCAAGCCGTTGTTCCCACAGAATTTGGTGATGGCATATCCTTTTTTATATCTCCTTTTCAATCTGAAATCCCAAACAATTCAACTGGTGGCTACCTTGGTCTTTTCAGTCCAGAATCTGCATTCAATAATACCAATAATTCCATAGTTGCGGTTGAGTTTGACAGCTTTAGCAACTTTTGGGACCCAACATTAGACCATGTCGGAATCAATGTGAATTCCATTGTATCAGTTGCTAATGTTTCCTGGAAGAGCAGCATGAAAGATGGGAGAACTGCTAATGTTTGGATAGAATATAATTCCACCACAAAGAATCTCAGTGTTTTCCTTACTTATGCAAAAGATCCTGTTTTTATGGGAAATTCTAGCGTCTGGCATGTCATTGATTTGAGGAAAGTTTTGCCAGAATTTGTCAGGGTTGGATTCTCTGCTTCAACAGGGAATTGGGTTGAATTACACAAAATAGTCTCTTGGACATTCAATTCAAGCTTGGAAAGTGATATGAAGGATGGGAATAACAAGAAGGTTGTTTTGGGGGTTAGTTTAAGTGTTGGTTTTGGTTTTCTTTTATGTGTTTCTGGGCTGTTCTGGTTCACCATTTGGAGAAAGAAACATTACATGAAGAAAGGAGAAGAAACAGGTAAAAGCTTTGAAGCTTCCATGGATGATGAATTTGAGAAAGGAACAGGACCAAAGAGATTCACCTACCAGGAGCTAAGTCAAGCAACAAATGATTTCTCTGAATTAGGAAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTATAAAGGTTTTCTCACAAATGAAAGCCTTCAAGTAGCTGTGAAGAAAGTTTCAAAAGGATCAAAGCAGGGGAAGAAGGAGTACATATCAGAAGTGAGAATAATCAGCAGGTTGAGACACAGAAACTTGGTCCAACTCATAGGTTGGTGCCATGAACAAGGTGAGTTCCTTCTTGTTTATGAATTCATGCCTAATGGAAGTCTAGACTCCCACCTATTTGGAAACAAAACCACACTTACTTGGACAGTAAGGTACAAAATAGCCCTAGGTTTAGCCTCTTCTCTCCTATATCTCCATGAAGAATGGGAACAATGTGTAGTCCACAGAGATATAAAGTCAAGCAATGTGATGTTAGATGCAAACTTCAATACAAAACTAGGTGATTTTGGTCTTGCAAGGCTGGTTGACCATGAACTTGGGTCTCAAACAACAGCTCTAGCAGGCACAATGGGATACTTAGCCCCAGAGTGTGTAACCACAGGAAAAGCAAGTAAAGAATCTGATGTTTATAGTTTTGGGGTGGTGTCCCTGGAGATCACATGTGGAAGAAGACCAGTTGAAGTAAGAGCTGATGAACCTGGGAAGGTAAGAATGGTGGAGTGGGTGTGGGACCTATATGGGAAAGGGAAGCTTCTTGAAGCTACTGATGAGAAATTAAACTTGGAATATGATGAGAGACAAATTGAGAGCTTGATGATTGTAGGGTTATGGTGTTGCCATCCTGATCAGAAGATGAGACCTTCCATAAGGGAAGTCATAAAAGTGCTAAATTTTGAAGCTGATTTGCCAAGTCTTCCTTCAAAGCTTCCTGTTCCTATGTATTATGCTCCTCCAATGGAAATGTGCAGATTCTCTTACACATCGTCAGGGCCCACTGCTTCAACCAAAGGATCATCTTCATACTCATCAGTATCTGGTGGATCCAGAAAGTCCCTCTTGTTAGCACAAGCATAA 2031 0.4057 MASSNSVFLMLIFMLLLSSLPETVHSVFFNFTKFQPNMNNLIQFQGDAFSSDDVLQLTKNRLDGPITSSVGRATYAEPVRVWDKKTGKLTDFNTHFTFIMQAVVPTEFGDGISFFISPFQSEIPNNSTGGYLGLFSPESAFNNTNNSIVAVEFDSFSNFWDPTLDHVGINVNSIVSVANVSWKSSMKDGRTANVWIEYNSTTKNLSVFLTYAKDPVFMGNSSVWHVIDLRKVLPEFVRVGFSASTGNWVELHKIVSWTFNSSLESDMKDGNNKKVVLGVSLSVGFGFLLCVSGLFWFTIWRKKHYMKKGEETGKSFEASMDDEFEKGTGPKRFTYQELSQATNDFSELGKLGEGGFGGVYKGFLTNESLQVAVKKVSKGSKQGKKEYISEVRIISRLRHRNLVQLIGWCHEQGEFLLVYEFMPNGSLDSHLFGNKTTLTWTVRYKIALGLASSLLYLHEEWEQCVVHRDIKSSNVMLDANFNTKLGDFGLARLVDHELGSQTTALAGTMGYLAPECVTTGKASKESDVYSFGVVSLEITCGRRPVEVRADEPGKVRMVEWVWDLYGKGKLLEATDEKLNLEYDERQIESLMIVGLWCCHPDQKMRPSIREVIKVLNFEADLPSLPSKLPVPMYYAPPMEMCRFSYTSSGPTASTKGSSSYSSVSGGSRKSLLLAQA 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1476 676 CDD lectin_legume_LecRK_Arcelin_ConA 29 263 IPR001220 GO:0030246
Mibi10g1476 676 Pfam Legume lectin domain 29 270 IPR001220 GO:0030246
Mibi10g1476 676 FunFam L-type lectin-domain containing receptor kinase IX.1 25 272 - -
Mibi10g1476 676 ProSitePatterns Protein kinases ATP-binding region signature. 351 375 IPR017441 GO:0005524
Mibi10g1476 676 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Mibi10g1476 676 SUPERFAMILY Protein kinase-like (PK-like) 329 641 IPR011009 -
Mibi10g1476 676 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1476 676 SMART serkin_6 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1476 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mibi10g1476 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 267 IPR013320 -
Mibi10g1476 676 FunFam Lectin-domain containing receptor kinase A4.3 422 635 - -
Mibi10g1476 676 MobiDBLite consensus disorder prediction 652 676 - -
Mibi10g1476 676 Gene3D Transferase(Phosphotransferase) domain 1 422 636 - -
Mibi10g1476 676 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi10g1476 676 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
Mibi10g1476 676 FunFam L-type lectin-domain containing receptor kinase IX.1 330 421 - -
Mibi10g1476 676 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Mibi10g1476 676 Gene3D - 25 277 - -
Mibi10g1476 676 CDD STKc_IRAK 359 616 - -
Mibi10g1476 676 PANTHER - 43 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1476 Mibi-ChrMibi10 35534831 35536861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1476 4 634 Receptor kinase-like Gene Family AT5G10530 51.687 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi10g1476 Pkinase 6.4e-51 CL0016