Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1465 ATGATGTCTCAGGAAAATAACTCTCCTTCAAAGCAGCCTGCTGCTGCTTCCAAAGAAGACGGTAGCGGCCAGAGCTCTGGGGGTCGGAAAAACACCCCAACGAGGCCACCAGAACAAGGTTTGAAGTGTCCTAGGTGTGACTCACCAAACACCAAATTCTGTTACTACAATAATTACAGCCTGACACAGCCAAGGCATTTCTGTAAGACTTGCCGGAGATATTGGACAAAGGGTGGGGCCCTTCGCAATGTTCCCATCGGCGGTGGCTGCCGGAAAAACAAGAAGGTGAAGTCTTCACCGTCTTCTAGGCTCTCTGGTGACCTGAAAGATCCAAGCTTTCCGGGAGATCTTGGTGGGTTTAAGTTTTTTCATGGGATTTCACCTTCACTGCTGGATTTTCATCTAGGTGGGTCCGTACCTTTTCCTAAACTGAACCATCTTCCAGTACCTCCAAACACATATAATGCAATATCTTCATTTGGGGATGTTCAAGCTGTGACCTTTGATCCATCTGGGAGCTCAAATTCAATGATGAATTTCAATTATCCATCATCATCAACAGTTGGAGGAGGATTTAGCAGTGTGATTCAGGGTATGAGCACTATGAACGTGAATAGTAATCTTGCTTCTTCAATTGAATCATTGAGTTCTGTTAATCAAGACTTGCACTGGAAGCTTCAGCAACAGAGGCTGGCGATGCTGTTTGGCGGTGATGATGATGATGATGACGGTCGAATTCAGAAAGATGATGGTGTTTCATCGGCTGTTACTACTGCCACTATTAATCACCACCAAATCCAGAGGCCACAGCCCATTTTGTTTCAGAATCTTGAGATTTCAAAGGCTGATGAGATTAACTGTGTGGCTGCTTCTGGTAATAATAGTTCCAGAAAAGAACAAGGCTCATTTGCTGCTGGTAGTGGTGGTGATATACCTACAGAGTGGTTATTTGGGAATTCGACGTTTGCTTCTGTGCCCACAAGCAGTGTGAATAATGCAACCAATAACTGGAATTCTTCTGTTCATGCTTGGGGTGATGTGCAGCATCAATATAATGCTTTGCCCTAG 1068 0.4476 MMSQENNSPSKQPAAASKEDGSGQSSGGRKNTPTRPPEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSPSSRLSGDLKDPSFPGDLGGFKFFHGISPSLLDFHLGGSVPFPKLNHLPVPPNTYNAISSFGDVQAVTFDPSGSSNSMMNFNYPSSSTVGGGFSSVIQGMSTMNVNSNLASSIESLSSVNQDLHWKLQQQRLAMLFGGDDDDDDGRIQKDDGVSSAVTTATINHHQIQRPQPILFQNLEISKADEINCVAASGNNSSRKEQGSFAAGSGGDIPTEWLFGNSTFASVPTSSVNNATNNWNSSVHAWGDVQHQYNALP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1465 355 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Mibi10g1465 355 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Mibi10g1465 355 MobiDBLite consensus disorder prediction 1 33 - -
Mibi10g1465 355 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Mibi10g1465 355 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 231 IPR045174 GO:0003700|GO:0006355
Mibi10g1465 355 MobiDBLite consensus disorder prediction 86 109 - -
Mibi10g1465 355 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1465 Mibi-ChrMibi10 35408517 35409584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1465 2 355 C2C2-Dof Transcription Factor Family AT5G65590 38.874 2.03e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi10g1465 zf-Dof 1.4e-32 No_clan